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BaseInfo

ncRNA ID	novel_zma_miR2294
Species	Zea mays
Class	miRNA
Genome position	Chr5:79550991-79551102 [-]
Reference genome	RefGen_v4
Source	SRR2089712
Length	24
Mature sequence(if miRNA)	89 - GUUGGGGGUAUUAGAUGUAGUCGG - 112
Stem-loop(if miRNA)	---GU         U        UC      UAAAACUAAUUUCUCAGCCGAAGAUU      UGGGGGUAU AGAUGUAG  GGAUUA                          A      ||||||||| ||||||||  ||||||      AUCCUCAUA UUUAUAUC  GGGUUG                          A AGUUU         C        -U      GUUGACAUGAUCUAAGCAGAGUGAAA
Stem-loop sequence	GUUGGGGGUAUUAGAUGUAGUCGGAUUAUAAAACUAAUUUCUCAGCCGAAGAUUAAAAAGUGAGACGAAUCUAGUACAGUUGGUUGGGUCUAUAUUUCAUACUCCUAUUUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT084930.2	ncRNA:24   GGCUGAUGUAGAUUAUGGGGGUUG   1   ||||||||||=|||||||||*||| targets:267   CCGACUACAUUUAAUACCCCGAAC   290 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0209B02 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154684.1	ncRNA:24   GGCUGAUGUAGAUUAUGGGGGUUG   1   ||||||||||=|||||||||*||| targets:1933   CCGACUACAUUUAAUACCCCGAAC   1956 Target Full Sequence	2.5	Zea mays amino acid permease (LOC100281764), mRNA	NA	coding protein	psRNATarget
EU957829.1	ncRNA:24   GGCUGAUGUAGAUUAUGGGGGUUG   1   ||||||||||=|||||||||*||| targets:1933   CCGACUACAUUUAAUACCCCGAAC   1956 Target Full Sequence	2.5	Zea mays clone 1624895 amino acid permease mRNA, complete cds	NA	coding protein	psRNATarget
XM_008681237.2	ncRNA:24   GGCUGAUGUAGAUUAUGGGGGUUG   1   ||||||||||=|||||||||*||| targets:25   CCGACUACAUUUAAUACCCCGAAC   48 Target Full Sequence	2.5	PREDICTED: Zea mays E3 ubiquitin-protein ligase BOI-like (LOC103654397), mRNA	NA	coding protein	psRNATarget