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BaseInfo

ncRNA ID novel_zma_miR2293
Species Zea mays
Class miRNA
Genome position Chr5:31425575-31425678 [+]
Reference genome RefGen_v4
Source SRR2089712;SRR2287165;SRR2089707
Length 24
Mature sequence(if miRNA) 1 - AAUAGGAUGUUUCCACUGACGGUU - 24
Stem-loop(if miRNA) --                  A     AA  UAAGA                U
  AAUAGGAUGUUUCCACUG CGGUU  GU     UAACCGCCAGUGGAAA C
  |||||||||||||||||| |||||  ||     ||||||||||||||||
  UUAUCCUACAAAGGUGAC GCCAA  CA     GUUGGCGGUCACUUUU A
CU                  C     CA  UUGUG                A
Stem-loop sequence AAUAGGAUGUUUCCACUGACGGUUAAGUUAAGAUAACCGCCAGUGGAAAUCAAUUUUCACUGGCGGUUGGUGUUACACAACCGCCAGUGGAAACAUCCUAUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ101180.1
ncRNA:24   UUGGCAGUCACCUUUGUAGGAUAA   1
  |||||*|||||||||=||||||||
targets:81   AACCGCCAGUGGAAAUAUCCUAUU   104

2.5 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget