ncRNA ID | novel_zma_miR2292 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:111861899-111862031 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089712 |
Length | 24 |
Mature sequence(if miRNA) | 110 - AGGCAUCGAGUGAAGGGUAGCGUC - 133 |
Stem-loop(if miRNA) |
----AG  A        A                U  GCCC A  A     CCUCCGA  G     UU           GC UCGAGUGA GGGUAGCGUCUUCGCC UC    C AC UUUUC       GG ACCAG  UGACU       || |||||||| |||||||||||||||| ||    | || |||||       || |||||  ||||A       UG AGCUCGCU CCCGUCGCAGAGGUGG AG    G UG AGAAG       CC UGGUC  ACUGA CCUUGG  A        -                U  -AUC C  C     -------  G     -U     |
Stem-loop sequence | AGGCAUCGAGUGAAGGGUAGCGUCUUCGCCUUCGCCCCAACAUUUUCCCUCCGAGGGACCAGUUUGACUAAGUCAUCUGGUGCCGAAGACGUCGCUAGAUGGUGGAGACGCUGCCCUCGCUCGAAGUGGUUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU973405.1 |
|
1.5 | Zea mays clone 398173 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |