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BaseInfo

ncRNA ID novel_zma_miR2291
Species Zea mays
Class miRNA
Genome position Chr5:131702868-131702939 [-]
Reference genome RefGen_v4
Source SRR2089712;SRR1997865
Length 24
Mature sequence(if miRNA) 1 - ACAUAAGCUUAUGUCUGACGGUCU - 24
Stem-loop(if miRNA) --               G      C        GGC
  GCCGUCAGACAUAAG UUAUGU CGACGGCU   A
  ||||||||||||||| |||||| ||||||||
  UGGCAGUCUGUAUUC AAUACA GCUGCCGG   G
UC               G      C        ACA
Stem-loop sequence GCCGUCAGACAUAAGGUUAUGUCCGACGGCUGGCAGACAGGCCGUCGCACAUAAGCUUAUGUCUGACGGUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ239089.1
ncRNA:24   UCUGGCAGUCUGUAUUCGAAUACA   1
  =|||-|||=|||||||||||||||
targets:1   GGAC-GUCGGACAUAAGCUUAUGU   23

1.0 Sequence 5084 from Patent EP2985353 NA coding protein psRNATarget
HI406959.1
ncRNA:24   UCUGGCAGUCUGUAUUCGAAUACA   1
  =|||-|||=|||||||||||||||
targets:1   GGAC-GUCGGACAUAAGCUUAUGU   23

1.0 Sequence 5084 from Patent EP2074227 NA coding protein psRNATarget
JB167420.1
ncRNA:24   UCUGGCAGUCUGUAUUCGAAUACA   1
  =|||-|||=|||||||||||||||
targets:1   GGAC-GUCGGACAUAAGCUUAUGU   23

1.0 Sequence 5084 from Patent EP2559767 NA coding protein psRNATarget