ncRNA ID | novel_zma_miR2280 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:210556656-210556775 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089712 |
Length | 24 |
Mature sequence(if miRNA) | 97 - UGAGUUUGACGAAGAACGUGGGUA - 120 |
Stem-loop(if miRNA) |
--U  GU    -CGA                 A        ---         U    CCUG    GA  UUGA    AGAACGUGGGUACCCAC UUUUUAAU   UUAAGUUCG GCGG    G    ||  ||||    ||||||||||||||||| ||||||||   ||||||||| ||||    C    CU  AAUU    UCUUGCACCCAUGGGUG AAGGAUUA   AAUUCAAGC UGCC    U GUG  UG    UAAC                 C        UGG         -    AAAA |
Stem-loop sequence | UGAGUUUGACGAAGAACGUGGGUACCCACAUUUUUAAUUUAAGUUCGUGCGGCCUGGCUAAAACCGUCGAACUUAAGGUAUUAGGAACGUGGGUACCCACGUUCUCAAUUUAAGUUCGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008676630.2 |
|
1.0 | PREDICTED: Zea mays probable membrane-associated kinase regulator 4 (LOC103651037), mRNA | NA | coding protein | psRNATarget |