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BaseInfo

ncRNA ID novel_zma_miR2280
Species Zea mays
Class miRNA
Genome position Chr5:210556656-210556775 [-]
Reference genome RefGen_v4
Source SRR2089712
Length 24
Mature sequence(if miRNA) 97 - UGAGUUUGACGAAGAACGUGGGUA - 120
Stem-loop(if miRNA) --U  GU    -CGA                 A        ---         U    CCUG
   GA  UUGA    AGAACGUGGGUACCCAC UUUUUAAU   UUAAGUUCG GCGG    G
   ||  ||||    ||||||||||||||||| ||||||||   ||||||||| ||||    C
   CU  AAUU    UCUUGCACCCAUGGGUG AAGGAUUA   AAUUCAAGC UGCC    U
GUG  UG    UAAC                 C        UGG         -    AAAA
Stem-loop sequence UGAGUUUGACGAAGAACGUGGGUACCCACAUUUUUAAUUUAAGUUCGUGCGGCCUGGCUAAAACCGUCGAACUUAAGGUAUUAGGAACGUGGGUACCCACGUUCUCAAUUUAAGUUCGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008676630.2
ncRNA:24   AUGGGUGCAAGAAGCAGUUUGAGU   1
  |**=||=|||||||||||||||||
targets:993   UCGUCAUGUUCUUCGUCAAACUCA   1016

1.0 PREDICTED: Zea mays probable membrane-associated kinase regulator 4 (LOC103651037), mRNA NA coding protein psRNATarget