ncRNA ID | osa-miR167i-5p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:27674749-27674949 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - UGAAGCUGCCAGCAUGAUCUG - 31 |
Stem-loop(if miRNA) |
U       GC         C              C     UUGCACU       AUAUUGAAUUCAGCCAGGAGCUGCUACUGCAGUUCUGAUCUCGAUCUGC  GUGAGAG  UGAAGCUGC AGCAUGAUCUGGUC AUGAG       GCUGAAU                                                 A  |||||||  ||||||||| |||||||||||||| |||||       |||||||  CACUCUC  ACUUCGACG UUGUACUAGACUAG UACUU       AAUUUCU                                                 U U       UC         -              C     ------U       GUACCUACGGAAGUUUGGCUAGUUUAGGUAUGUAUCGAGUCUUGUUGCU |
Stem-loop sequence | UGUGAGAGGCUGAAGCUGCCAGCAUGAUCUGGUCCAUGAGUUGCACUGCUGAAUAUAUUGAAUUCAGCCAGGAGCUGCUACUGCAGUUCUGAUCUCGAUCUGCAUUCGUUGUUCUGAGCUAUGUAUGGAUUUGAUCGGUUUGAAGGCAUCCAUGUCUUUAAUUUCAUCGAUCAGAUCAUGUUGCAGCUUCACUCUCUCACU |
1 | PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"; Jones-Rhoades MW, Bartel DP; Mol Cell. 14:787-799(2004). |
2 | PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"; Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y; PLoS Pathog. 7:e1002176(2011). |