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BaseInfo

ncRNA ID	novel_zma_miR2279
Species	Zea mays
Class	miRNA
Genome position	Chr5:211349096-211349185 [-]
Reference genome	RefGen_v4
Source	SRR2089712
Length	24
Mature sequence(if miRNA)	67 - AGGGCGGACUGUCCGCGGCCUGGU - 90
Stem-loop(if miRNA)	--A G            C G     U    UGCUG     -    -  U    G GCGGACUGUCCG G CCUGG GCGC     GGACU UCUG CC G    | |||||||||||| | ||||| ||||     ||||| |||| ||    C CGCCUGGCAGGC C GGAUC CGCG     CCUGG AGGC GG A GUG G            - G     C    -----     C    C  C
Stem-loop sequence	AGGGCGGACUGUCCGCGGCCUGGUGCGCUGCUGGGACUUCUGCCUGACGGCCGGACGGUCCGCGCCCUAGGGCCGGACGGUCCGCGCGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020539115.1	ncRNA:24   UGGUCCGGCGCCUGUCAGGCGGGA   1   *||||||||||||||||||||||* targets:2707   CCCAGGCCGCGGACAGUCCGCCCC   2730 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget
NM_001196968.1	ncRNA:24   UGGUCCGGCGCCUGUCAGGCGGGA   1   *=|||||||||||||||||||||* targets:1264   CUCAGGCCGCGGACAGUCCGCCCC   1287 Target Full Sequence	1.0	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
BT088349.1	ncRNA:24   UGGUCCGGCGCCUGUCAGGCGGGA   1   *=|||||||||||||||||||||* targets:1264   CUCAGGCCGCGGACAGUCCGCCCC   1287 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget