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BaseInfo

ncRNA ID	novel_zma_miR2275
Species	Zea mays
Class	miRNA
Genome position	Chr5:219973742-219973821 [+]
Reference genome	RefGen_v4
Source	SRR2089712;SRR2287165
Length	20
Mature sequence(if miRNA)	1 - GAGAGAAUUGGAGGGGCUAA - 20
Stem-loop(if miRNA)	--G    A    GA           UCCCUAA     CAAUUU    AGAG AUUG  GGGGCUAAAAU       CUCUU      U    |||| ||||  |||||||||||       |||||      A    UCUC UAAC  CCCCGAUUUUA       GAGAA      A UUG    A    UC           -------     ACGAUA
Stem-loop sequence	GAGAGAAUUGGAGGGGCUAAAAUUCCCUAACUCUUCAAUUUUAAAUAGCAAAGAGAUUUUAGCCCCCUCAAUACUCUGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008676338.2	ncRNA:20   AAUCGGGGAGGUUAAGAGAG   1   |||||||||=|||||||||* targets:1774   UUAGCCCCUUCAAUUCUCUA   1793 Target Full Sequence	2.5	PREDICTED: Zea mays probable inactive purple acid phosphatase 16 (LOC103650765), mRNA	NA	coding protein	psRNATarget
JB163850.1	ncRNA:20   AAUCGGGGAGGUUAAGAGAG   1   ||||||||||||||||*||| targets:73   UUAGCCCCUCCAAUUCCCUC   92 Target Full Sequence	1.5	Sequence 1514 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235519.1	ncRNA:20   AAUCGGGGAGGUUAAGAGAG   1   ||||||||||||||||*||| targets:73   UUAGCCCCUCCAAUUCCCUC   92 Target Full Sequence	1.5	Sequence 1514 from Patent EP2985353	NA	coding protein	psRNATarget
HI403389.1	ncRNA:20   AAUCGGGGAGGUUAAGAGAG   1   ||||||||||||||||*||| targets:73   UUAGCCCCUCCAAUUCCCUC   92 Target Full Sequence	1.5	Sequence 1514 from Patent EP2074227	NA	coding protein	psRNATarget
EU948107.1	ncRNA:20   AAUCGGGGAGGUUAAGAGAG   1   *|||||||||||||||||*| targets:45   AUAGCCCCUCCAAUUCUCCC   64 Target Full Sequence	1.5	Zea mays clone 369900 mRNA sequence	NA	coding protein	psRNATarget
EU957568.1	ncRNA:20   AAUCGGGGAGGUUAAGAGAG   1   |||||*|*|||||||||||| targets:914   UUAGCGCAUCCAAUUCUCUC   933 Target Full Sequence	2.5	Zea mays clone 1597470 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget