ncRNA ID | novel_zma_miR2271 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:201737170-201737239 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089712 |
Length | 21 |
Mature sequence(if miRNA) | 50 - UAAGGGAGAUUGGAGGAGAUU - 70 |
Stem-loop(if miRNA) |
--    U          G ------    C G     UU   UCUC CUCUAGUCUU U      CACC U AGAUC  G   |||| |||||||||| |      |||| | |||||   AGAG GAGGUUAGAG G      GUGG A UUUAG  U UU    -          G AAUUUG    - G     CU |
Stem-loop sequence | UCUCUCUCUAGUCUUGUCACCCUGAGAUCUUGUUCGAUUUGAGGUGGUUUAAGGGAGAUUGGAGGAGAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008669496.2 |
|
2.5 | PREDICTED: Zea mays hypothetical protein (LOC100277924), transcript variant X3, mRNA | NA | coding protein | psRNATarget |