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BaseInfo

ncRNA ID	osa-miR5148b
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:27436650-27436727 [+]
Reference genome	MSU7
Source	miRBase
Length	24
Mature sequence(if miRNA)	51 - UGAGGGGUAGAAAUGUCAUAUCAU - 74
Stem-loop(if miRNA)	---UAC            G         --CAA     AG       GAUAUGACGUUU UACCCCUCA     GUAUA  U       |||||||||||| |||||||||     |||||  A       CUAUACUGUAAA AUGGGGAGU     UAUGU  U UGUGUA            G         AACUG     AA
Stem-loop sequence	UACGAUAUGACGUUUGUACCCCUCACAAGUAUAAGUAUAAUGUAUGUCAAUGAGGGGUAGAAAUGUCAUAUCAUGUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015759864.1	ncRNA:24   UA--CUAUACUGUAAAGAUGGGGAGU   1   ||--|||||||||||||||||||||| targets:1048   AUACGAUAUGACAUUUCUACCCCUCA   1073 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group mitotic-spindle organizing protein 1B (LOC4333190), mRNA	mitotic-spindle organizing protein 1B(LOC4333190)	coding protein	psRNATarget
XM_015772668.1	ncRNA:24   UA--CUAUACUGUAAAGAUGGGGAGU   1   ||--|||||||||||||||||||||| targets:1048   AUACGAUAUGACAUUUCUACCCCUCA   1073 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group mitotic-spindle organizing protein 1B-like (LOC107277991), mRNA	mitotic-spindle organizing protein 1B-like(LOC107277991)	coding protein	psRNATarget

Reference

1	PMID:21525786 "Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus"; Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D; RNA Biol. 8:538-547(2011).