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BaseInfo

ncRNA ID	novel_zma_miR2262
Species	Zea mays
Class	miRNA
Genome position	Chr5:135669129-135669175 [+]
Reference genome	RefGen_v4
Source	SRR2089712
Length	22
Mature sequence(if miRNA)	26 - GCAGGUGACCGUUGGCGCGCAU - 47
Stem-loop(if miRNA)	--    -     U    GG     C   GUGC CUAAC GUUA  UCUGU A   |||| ||||| ||||  |||||   CGCG GGUUG CAGU  GGACG G UA    C     C    --     A
Stem-loop sequence	GUGCCUAACUGUUAGGUCUGUCAGAGCAGGUGACCGUUGGCGCGCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT016820.1	ncRNA:22   UACGC-GCGGUUGCCAGUGGACG   1   *||||-||||||||||||||||| targets:101   CUGCGGCGCCAACGGUCACCUGC   123 Target Full Sequence	2.0	Zea mays clone Contig653 mRNA sequence	NA	coding protein	psRNATarget
BT060603.1	ncRNA:22   UACGC-GCGGUUGCCAGUGGACG   1   ||*||-||=|||||||||||||| targets:1343   AUUCGGCGUCAACGGUCACCUGC   1365 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0021N16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020541939.1	ncRNA:22   UACGCGCGGUUGCCAGUGGACG   1   *||||||*|||||||||||*|| targets:1079   CUGCGCGACAACGGUCACCAGC   1100 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100272534 (LOC100272534), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541938.1	ncRNA:22   UACGCGCGGUUGCCAGUGGACG   1   *||||||*|||||||||||*|| targets:1092   CUGCGCGACAACGGUCACCAGC   1113 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100272534 (LOC100272534), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008667570.2	ncRNA:22   UACGCGCGGUUGCCAGUGGACG   1   =|**||||||||||*||||||| targets:595   GUCGGCGCCAACGGCCACCUGC   616 Target Full Sequence	2.5	PREDICTED: Zea mays NDR1/HIN1-like protein 2 (LOC103644355), mRNA	NA	coding protein	psRNATarget