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BaseInfo

ncRNA ID novel_zma_miR2260
Species Zea mays
Class miRNA
Genome position Chr5:117669209-117669280 [+]
Reference genome RefGen_v4
Source SRR2089712;SRR5451006;SRR2089703;SRR2089706
Length 22
Mature sequence(if miRNA) 51 - CAGCGCGCGGCCUGAAGCGGAG - 72
Stem-loop(if miRNA) --G          A      ---G C   -A   U  A
   UGUUUUAGGC GCGCGU    C GAG  CCG GG G
   |||||||||| ||||||    | |||  ||| ||
   GCGAAGUCCG CGCGCG    G UUC  GGU UC G
GAG          G      ACAA U   GA   U  A
Stem-loop sequence GUGUUUUAGGCAGCGCGUGCCGAGACCGUGGAGGACUUUGGAGCUUUGAACAGCGCGCGGCCUGAAGCGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU947689.1
ncRNA:22   GAGGCGAAGUCCGGCGCGCGAC   1
  ***||||*||||||||||||*|
targets:393   ACGCGCUCCAGGCCGCGCGCCG   414

2.5 Zea mays clone 352767 mRNA sequence NA coding protein psRNATarget