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BaseInfo

ncRNA ID novel_zma_miR2256
Species Zea mays
Class miRNA
Genome position Chr4:83896113-83896320 [+]
Reference genome RefGen_v4
Source SRR2089712;SRR2287031;SRR5451006;SRR2089701
Length 24
Mature sequence(if miRNA) 1 - CCUGUUCCAUCGACCAGACCUCGG - 24
Stem-loop(if miRNA) --                                                                                                     U
  CCUGUUCCAUCGACCAGACCUCGGGAACCGUCCUGGGCUUCCUUUAAUAUCCGAAGCCCAGGGCUCCCGUUAUACCUGCCCUAUAUAUAUAUAUAUAUAUA A
  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  GGACAAGGUAGCUGGUCUGGAGCCCUUGGCAGGACCCGAAGGAAAUUAUAGGCUUCGGGUCCCGAGGGCAAUAUGGACGGGAUAUAUAUAUAUAUAUAUAU U
GC                                                                                                     A
Stem-loop sequence CCUGUUCCAUCGACCAGACCUCGGGAACCGUCCUGGGCUUCCUUUAAUAUCCGAAGCCCAGGGCUCCCGUUAUACCUGCCCUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAGGGCAGGUAUAACGGGAGCCCUGGGCUUCGGAUAUUAAAGGAAGCCCAGGACGGUUCCCGAGGUCUGGUCGAUGGAACAGGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008646651.2
ncRNA:24   GGCU-----CCAGACCAGCUACCUUGUCC   1
  =||=-----|||||||*||||||||||||
targets:127   UCGGUUCCCGGUCUGGCCGAUGGAACAGG   155

1.5 PREDICTED: Zea mays uncharacterized LOC103626254 (LOC103626254), transcript variant X2, mRNA NA coding protein psRNATarget