ncRNA ID | novel_zma_miR2256 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:83896113-83896320 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089712;SRR2287031;SRR5451006;SRR2089701 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CCUGUUCCAUCGACCAGACCUCGG - 24 |
Stem-loop(if miRNA) |
--                                                                                                     U   CCUGUUCCAUCGACCAGACCUCGGGAACCGUCCUGGGCUUCCUUUAAUAUCCGAAGCCCAGGGCUCCCGUUAUACCUGCCCUAUAUAUAUAUAUAUAUAUA A   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   GGACAAGGUAGCUGGUCUGGAGCCCUUGGCAGGACCCGAAGGAAAUUAUAGGCUUCGGGUCCCGAGGGCAAUAUGGACGGGAUAUAUAUAUAUAUAUAUAU U GC                                                                                                     A |
Stem-loop sequence | CCUGUUCCAUCGACCAGACCUCGGGAACCGUCCUGGGCUUCCUUUAAUAUCCGAAGCCCAGGGCUCCCGUUAUACCUGCCCUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAGGGCAGGUAUAACGGGAGCCCUGGGCUUCGGAUAUUAAAGGAAGCCCAGGACGGUUCCCGAGGUCUGGUCGAUGGAACAGGCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008646651.2 |
|
1.5 | PREDICTED: Zea mays uncharacterized LOC103626254 (LOC103626254), transcript variant X2, mRNA | NA | coding protein | psRNATarget |