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BaseInfo

ncRNA ID	novel_zma_miR2246
Species	Zea mays
Class	miRNA
Genome position	Chr4:203356873-203356951 [-]
Reference genome	RefGen_v4
Source	SRR1583944;SRR2638137;SRR2647221;SRR2647387;SRR2647388;SRR2647389;SRR2647391;SRR2647467
Length	23
Mature sequence(if miRNA)	57 - CCGCCACUAGAAAUCGUAUUUCC - 79
Stem-loop(if miRNA)	--                 --    CC          CUA   CCGCCACUAGAAAUCGU  AUUU  ACAAGCGGUU   U   |||||||||||||||||  ||||  ||||||||||   A   GGUGGUGAUCUUUAGUA  UAAA  UGUUCGCCAA   A UU                 CC    AA          AAG
Stem-loop sequence	CCGCCACUAGAAAUCGUAUUUCCACAAGCGGUUCUAUAAGAAAACCGCUUGUAAAAAUCCAUGAUUUCUAGUGGUGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163546.1	ncRNA:23   CCUUUAUGCUAAAGAUCACCGCC   1   *||||||=|||||||||||*||| targets:73   AGAAAUAUGAUUUCUAGUGUCGG   95 Target Full Sequence	2.5	Sequence 1210 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235215.1	ncRNA:23   CCUUUAUGCUAAAGAUCACCGCC   1   *||||||=|||||||||||*||| targets:73   AGAAAUAUGAUUUCUAGUGUCGG   95 Target Full Sequence	2.5	Sequence 1210 from Patent EP2985353	NA	coding protein	psRNATarget
HI403085.1	ncRNA:23   CCUUUAUGCUAAAGAUCACCGCC   1   *||||||=|||||||||||*||| targets:73   AGAAAUAUGAUUUCUAGUGUCGG   95 Target Full Sequence	2.5	Sequence 1210 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235142.1	ncRNA:23   CCUUUAUGCUAAAGAUCACCGCC   1   **|||*|=||||||||||||||| targets:1   AUAAAAAUGAUUUCUAGUGGCGG   23 Target Full Sequence	2.0	Sequence 1137 from Patent EP2985353	NA	coding protein	psRNATarget
JB163473.1	ncRNA:23   CCUUUAUGCUAAAGAUCACCGCC   1   **|||*|=||||||||||||||| targets:1   AUAAAAAUGAUUUCUAGUGGCGG   23 Target Full Sequence	2.0	Sequence 1137 from Patent EP2559767	NA	coding protein	psRNATarget
HI403012.1	ncRNA:23   CCUUUAUGCUAAAGAUCACCGCC   1   **|||*|=||||||||||||||| targets:1   AUAAAAAUGAUUUCUAGUGGCGG   23 Target Full Sequence	2.0	Sequence 1137 from Patent EP2074227	NA	coding protein	psRNATarget
HI403097.1	ncRNA:22   CU-UUAUGCUAAAGAUCACCGCC   1   ||-||*|=||||||||||||||| targets:1   GAUAAAAUGAUUUCUAGUGGCGG   23 Target Full Sequence	2.0	Sequence 1222 from Patent EP2074227	NA	coding protein	psRNATarget
JB163558.1	ncRNA:22   CU-UUAUGCUAAAGAUCACCGCC   1   ||-||*|=||||||||||||||| targets:1   GAUAAAAUGAUUUCUAGUGGCGG   23 Target Full Sequence	2.0	Sequence 1222 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235227.1	ncRNA:22   CU-UUAUGCUAAAGAUCACCGCC   1   ||-||*|=||||||||||||||| targets:1   GAUAAAAUGAUUUCUAGUGGCGG   23 Target Full Sequence	2.0	Sequence 1222 from Patent EP2985353	NA	coding protein	psRNATarget