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BaseInfo

ncRNA ID osa-miR5814
Species Oryza sativa
Class miRNA
Genome position Chr6:26661349-26661456 [-]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 75 - AAUCAAGUUAGGAACCAUGCAAGU - 98
Stem-loop(if miRNA)   C        A            C A       UG      -A    U  CC
GG UACUGGUA UCAAGUUAGGAA C UGCAAGU  UUUAUG  GUUG GC  U
|| |||||||| |||||||||||| | |||||||  ||||||  |||| ||  C
CC GUGACCGU AGUUCAAUCUUU G ACGUUCA  AGAUAC  CGAU CG  U
  U        G            A A       GU      CG    C  UG
Stem-loop sequence GGCUACUGGUAAUCAAGUUAGGAACCAUGCAAGUUGUUUAUGAGUUGUGCCCUCUGUGCCUAGCGCCAUAGAUGACUUGCAAGAUUUCUAACUUGAGUGCCAGUGUCC

Reference

1 PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage";
Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ;
Plant Cell. 23:4185-4207(2011).