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BaseInfo

ncRNA ID novel_zma_miR2237
Species Zea mays
Class miRNA
Genome position Chr4:206725765-206725870 [-]
Reference genome RefGen_v4
Source SRR1583944
Length 23
Mature sequence(if miRNA) 1 - CUCUGUUGAUCUGCCAAGUGGGC - 23
Stem-loop(if miRNA) --CA     AG   A         -   UG    AAAA   ---       C  C
    ACUUG  GGA CAACGGAGG UGG  GAGA    CCA   UGUGCGG GC A
    |||||  ||| ||||||||| |||  ||||    |||   ||||||| ||
    UGAAC  UCU GUUGUCUCC ACC  CUCU    GGU   GUACGUC CG A
CGGG     CG   A         U   GU    ACAA   CAU       U  G
Stem-loop sequence CAACUUGAGGGAACAACGGAGGUGGUGGAGAAAAACCAUGUGCGGCGCCAAGGCUCUGCAUGUACUGGAACAUCUCUGCCAUCCUCUGUUGAUCUGCCAAGUGGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008655737.1
ncRNA:23   CGGGUGAACCGUCUAGUUGUCUC   1
  ||||=||||||||||||||||||
targets:292   GCCCGCUUGGCAGAUCAACAGAG   314

1.0 PREDICTED: Zea mays uncharacterized LOC103634133 (LOC103634133), mRNA NA coding protein psRNATarget