ncRNA ID | novel_zma_miR2232 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:29871654-29871845 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089712;SRR2089713;SRR2089715;SRR2089699;SRR2089708 |
Length | 22 |
Mature sequence(if miRNA) | 171 - AAUAGGUUUGGUUUGCAUUUGA - 192 |
Stem-loop(if miRNA) |
--             -      A  AC            A       CU    G   GU                       A GUUUUCAAAACAA   AGAUGCAAACCAA CCUAUU GU  AAACCGUGCAAA CCAACAC  GGAU GAG  GGGAGGACCUUUUUGAAAAUAUC U             C   ||||||||||||| |||||| ||  |||||||||||| |||||||  |||| |||  ||||||||||||||||||||||| |             C   UUUACGUUUGGUU GGAUAA CA  UUUGGCACGUUU GGUUGUG  CCUA CUC  CCCUCCUGGAAAAAUUUUUAUAG G             C AG             U      C  CA            -       UU    A   UG                       - UCCCCUCCACUCU |
Stem-loop sequence | AGAUGCAAACCAACCUAUUAGUACAAACCGUGCAAAACCAACACCUGGAUGGAGGUGGGAGGACCUUUUUGAAAAUAUCAUGUUUUCAAAACAACCCUCUCACCUCCCCUGGAUAUUUUUAAAAAGGUCCUCCCGUCUCAAUCCUUGUGUUGGUUUGCACGGUUUACACCAAUAGGUUUGGUUUGCAUUUGA |