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BaseInfo

ncRNA ID novel_zma_miR2232
Species Zea mays
Class miRNA
Genome position Chr4:29871654-29871845 [+]
Reference genome RefGen_v4
Source SRR2089712;SRR2089713;SRR2089715;SRR2089699;SRR2089708
Length 22
Mature sequence(if miRNA) 171 - AAUAGGUUUGGUUUGCAUUUGA - 192
Stem-loop(if miRNA) --             -      A  AC            A       CU    G   GU                       A GUUUUCAAAACAA
  AGAUGCAAACCAA CCUAUU GU  AAACCGUGCAAA CCAACAC  GGAU GAG  GGGAGGACCUUUUUGAAAAUAUC U             C
  ||||||||||||| |||||| ||  |||||||||||| |||||||  |||| |||  ||||||||||||||||||||||| |             C
  UUUACGUUUGGUU GGAUAA CA  UUUGGCACGUUU GGUUGUG  CCUA CUC  CCCUCCUGGAAAAAUUUUUAUAG G             C
AG             U      C  CA            -       UU    A   UG                       - UCCCCUCCACUCU
Stem-loop sequence AGAUGCAAACCAACCUAUUAGUACAAACCGUGCAAAACCAACACCUGGAUGGAGGUGGGAGGACCUUUUUGAAAAUAUCAUGUUUUCAAAACAACCCUCUCACCUCCCCUGGAUAUUUUUAAAAAGGUCCUCCCGUCUCAAUCCUUGUGUUGGUUUGCACGGUUUACACCAAUAGGUUUGGUUUGCAUUUGA