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BaseInfo

ncRNA ID	osa-miR156j-3p
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:26554795-26554959 [+]
Reference genome	MSU7
Source	miRBase
Length	22
Mature sequence(if miRNA)	108 - GCUCGCUCCUCUUUCUGUCAGC - 129
Stem-loop(if miRNA)	----      UC   CAU    AAGGC     U          -   -         A     C  C   U  C    G UUGGGGCGGG    GCGGGA  GAG   AUGA     GAGAU GUUGACAGAA GAG AGUGAGCAC CGGCG GG GGC AG CAUC G ||||||||||    ||||||  |||   ||||     ||||| |||||||||| ||| ||||||||| ||||| || ||| || |||| C AGCCCCGCCC    CGCCCU  CUC   UACU     CUCUA CGACUGUCUU CUC UCGCUCGUG GCCGC CC CCG UC GUAG G           CCUA      CC   -AC    -----     -          U   C         C     -  -   -  C    G
Stem-loop sequence	UUGGGGCGGGGCGGGAUCGAGCAUAUGAAAGGCGAGAUUGUUGACAGAAGAGAGUGAGCACACGGCGCGGCGGCUAGCCAUCGGCGGGAUGCCUGCCCCCGCCGCGUGCUCGCUCCUCUUUCUGUCAGCAUCUCUCAUCACUCCCUCCCGCAUCCCCCGCCCCGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK243212.1	ncRNA:22   CGACUGUCUUUCUCCUCGCUCG   1   |*|||*|||||||||||*|||| targets:642   GAUGAGAGAAAGAGGAGGGAGC   663 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J100042M20, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:12101121 "MicroRNAs in plants"; Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP; Genes Dev. 16:1616-1626(2002).
2	PMID:21901091 "Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"; Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y; PLoS Pathog. 7:e1002176(2011).