ncRNA ID | novel_zma_miR2220 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:232935733-232935798 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CAACGACUAGUUCUAGGUGGCACU - 24 |
Stem-loop(if miRNA) |
--   UG    C     -   --C     -  CA G   UGU  CCUG GGACU GUC   GGUGC AC  G G   |||  |||| ||||| |||   ||||| ||  |   ACG  GGAU CUUGA CAG   CCACG UG  C A UC   GU    -     U   CAA     A  -A A |
Stem-loop sequence | UGUUGCCUGCGGACUGUCCGGUGCACCAGGGAACAGUAGCACCAACGACUAGUUCUAGGUGGCACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008662326.2 |
|
2.5 | PREDICTED: Zea mays NAC domain-containing protein 37 (LOC103639595), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008662324.2 |
|
2.5 | PREDICTED: Zea mays NAC domain-containing protein 37 (LOC103639595), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008662328.2 |
|
2.5 | PREDICTED: Zea mays NAC domain-containing protein 37 (LOC103639595), transcript variant X3, mRNA | NA | coding protein | psRNATarget |