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BaseInfo

ncRNA ID novel_zma_miR2218
Species Zea mays
Class miRNA
Genome position Chr4:203135948-203136006 [+]
Reference genome RefGen_v4
Source SRR2089712
Length 24
Mature sequence(if miRNA) 1 - UGUAAUGUCUCUGGCACUCGGCAA - 24
Stem-loop(if miRNA) --   A    CUC               AG
  UGU AUGU   UGGCACUCGGCAAAG  G
  ||| ||||   |||||||||||||||  C
  ACG UGCA   GCCGUGAGCCGUUUC  A
UC   A    --U               GC
Stem-loop sequence UGUAAUGUCUCUGGCACUCGGCAAAGAGGCACGCUUUGCCGAGUGCCGUACGUAGCACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406639.1
ncRNA:24   AACGGCUCACGGUCUCUGUAAUGU   1
  |||||||||||||*||||||||||
targets:173   UUGCCGAGUGCCAUAGACAUUACA   196

1.5 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget
LQ238769.1
ncRNA:24   AACGGCUCACGGUCUCUGUAAUGU   1
  |||||||||||||*||||||||||
targets:173   UUGCCGAGUGCCAUAGACAUUACA   196

1.5 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget
JB167100.1
ncRNA:24   AACGGCUCACGGUCUCUGUAAUGU   1
  |||||||||||||*||||||||||
targets:173   UUGCCGAGUGCCAUAGACAUUACA   196

1.5 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget