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BaseInfo

ncRNA ID novel_zma_miR2213
Species Zea mays
Class miRNA
Genome position Chr10:61592395-61592476 [-]
Reference genome RefGen_v4
Source SRR2089712;SRR2089713
Length 24
Mature sequence(if miRNA) 59 - UGACAGAUGGAUGGAUUAGAUCAC - 82
Stem-loop(if miRNA) --   -         --     A     -------CAUG      A
  UGA CAGAUGGAU  GGAUU GAUCA           UACAAA U
  ||| |||||||||  ||||| |||||           |||||| G
  ACU GUUUACCUA  CUUAA CUAGU           AUGUUU U
CU   A         AG     -     UCCCCCUCACA      U
Stem-loop sequence UGACAGAUGGAUGGAUUAGAUCACAUGUACAAAAUGUUUUUGUAACACUCCCCCUUGAUCAAUUCGAAUCCAUUUGAUCAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU974750.1
ncRNA:24   CACUAGAUUAGGUAGGUAGACAGU   1
  *|*|||||||||||||||||*||*
targets:113   CUAAUCUAAUCCAUCCAUCUAUCC   136

2.5 Zea mays clone 457404 hypothetical protein mRNA, complete cds NA coding protein psRNATarget