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BaseInfo

ncRNA ID novel_zma_miR2211
Species Zea mays
Class miRNA
Genome position Chr3:113199100-113199178 [+]
Reference genome RefGen_v4
Source SRR2089712
Length 21
Mature sequence(if miRNA) 1 - ACUGACGGUUCUGUUACACCA - 21
Stem-loop(if miRNA) --    A       G   -   C           U     
  ACUG CGGUUCU UUA CAC AACCGCCAGUG AAAUAU
  |||| ||||||| ||| ||| ||||||||||| |||||C
  UGAC GCCAAGA AAU GUG UUGGCGGUCAC UUUAUC
GG    C       G   U   -           C     
Stem-loop sequence ACUGACGGUUCUGUUACACCAACCGCCAGUGUAAAUAUCCUAUUUCCACUGGCGGUUGUGUUAAGAGAACCGCCAGUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ101180.1
ncRNA:21   ACCACAUUGUCUUGGCAGUCA   1
  *|||||||||||||||*||||
targets:25   AGGUGUAACAGAACCGACAGU   45

1.5 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget