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BaseInfo

ncRNA ID	novel_zma_miR2210
Species	Zea mays
Class	miRNA
Genome position	Chr4:239759583-239759633 [-]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	1 - AGUCUGCAUGAUAUUGAUGGUUGU - 24
Stem-loop(if miRNA)	--      A   -      G  U  AU   GACCAU CAA AUCGUG CA AU  C   |||||| ||| |||||| || ||   UUGGUA GUU UAGUAC GU UG  G UG      -   A      -  C  AA
Stem-loop sequence	GACCAUACAAAUCGUGGCAUAUAUCGAAGUCUGCAUGAUAUUGAUGGUUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT084238.2	ncRNA:24   UGUUGGUAGUUAUAGUACGUCUGA   1   ||||||||||=||||||||||||| targets:87   ACAACCAUCAGUAUCAUGCAGACU   110 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0092I21 mRNA, complete cds	NA	coding protein	psRNATarget
BT070107.1	ncRNA:24   UGUUGGUAGUUAUAGUACGUCUGA   1   ||||=|||||=||||||||||||| targets:626   ACAAUCAUCAGUAUCAUGCAGACU   649 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0384J11 mRNA, complete cds	NA	coding protein	psRNATarget
EU943322.1	ncRNA:24   UGUUGGUAGUUAUAGUACGUCUGA   1   =|||||||||=||||||||||||| targets:320   GCAACCAUCAGUAUCAUGCAGACU   343 Target Full Sequence	1.0	Zea mays clone 1599166 mRNA sequence	NA	coding protein	psRNATarget
XM_020552711.1	ncRNA:24   UGUUGGUAGUUAUAGUACGUCUGA   1   =|||||||||=||||||*|||||| targets:991   GCAACCAUCAGUAUCAUACAGACU   1014 Target Full Sequence	2.5	PREDICTED: Zea mays CRIB domain-containing protein RIC7 (LOC103654132), mRNA	NA	coding protein	psRNATarget
BT083848.1	ncRNA:24   UGUUGGUAGUUAUAGUACGUCUGA   1   |=||=|||*=|||||||||||||| targets:207   AUAAUCAUGGAUAUCAUGCAGACU   230 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0046I03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001177136.1	ncRNA:24   UGUUGGUAGUUAUAGUACGUCUGA   1   |=||=|||*=|||||||||||||| targets:207   AUAAUCAUGGAUAUCAUGCAGACU   230 Target Full Sequence	2.0	Zea mays Cyclin-T1-5 (cl35348_1), mRNA	NA	coding protein	psRNATarget
BT024129.1	ncRNA:24   UGUUGGUAGUUAUAGUACGUCUGA   1   |=||=|||*=|||||||||||||| targets:232   AUAAUCAUGGAUAUCAUGCAGACU   255 Target Full Sequence	2.0	Zea mays clone EL01N0328C03 mRNA sequence	NA	coding protein	psRNATarget