ncRNA ID | novel_zma_miR2209 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:102365463-102365561 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089712;SRR2089713 |
Length | 21 |
Mature sequence(if miRNA) | 79 - UGGCAUCCAUUCUUGGCUAAG - 99 |
Stem-loop(if miRNA) |
--             CU    U   -     U    UG        A    G   UAGCCAAGAAUGG  UGCC AUC UCCAU AUUU  UUCAUCGC GGAA C   |||||||||||||  |||| ||| ||||| ||||  |||||||| ||||   AUCGGUUCUUACC  ACGG UAG AGGUG UAAA  AGGUAGUG CCUU C GA             -U    -   U     -    GU        -    C |
Stem-loop sequence | UAGCCAAGAAUGGCUUGCCUAUCUCCAUUAUUUUGUUCAUCGCAGGAAGCCCUUCCGUGAUGGAUGAAAUGUGGAUGAUGGCAUCCAUUCUUGGCUAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU943807.1 |
|
2.5 | Zea mays clone 1688171 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ060943.1 |
|
2.0 | TSA: Zea mays contig62065, mRNA sequence | NA | coding protein | psRNATarget |