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BaseInfo

ncRNA ID novel_zma_miR2201
Species Zea mays
Class miRNA
Genome position Chr3:12165442-12165535 [-]
Reference genome RefGen_v4
Source SRR2089712
Length 24
Mature sequence(if miRNA) 1 - UGUAAUGUCUCUGGCACUCGGCAA - 24
Stem-loop(if miRNA) --              C   A                 AAG   UAG
  GCCGAGUGUCAGGG CAU ACACUCGGCAAAGAACC   ACC   G
  |||||||||||||| ||| |||||||||||||||||   |||
  CGGCUCACGGUCUC GUA UGUGAGCCGUUUCUUGG   UGG   C
AA              U   A                 AUA   CCA
Stem-loop sequence GCCGAGUGUCAGGGCCAUAACACUCGGCAAAGAACCAAGACCUAGGCACCGGUAUAGGUUCUUUGCCGAGUGUAAUGUCUCUGGCACUCGGCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ238769.1
ncRNA:24   AACGGCUCACGGUCUCUGUAAUGU   1
  |||||||||||||*||||||||||
targets:173   UUGCCGAGUGCCAUAGACAUUACA   196

1.5 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget
JB167100.1
ncRNA:24   AACGGCUCACGGUCUCUGUAAUGU   1
  |||||||||||||*||||||||||
targets:173   UUGCCGAGUGCCAUAGACAUUACA   196

1.5 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget
HI406639.1
ncRNA:24   AACGGCUCACGGUCUCUGUAAUGU   1
  |||||||||||||*||||||||||
targets:173   UUGCCGAGUGCCAUAGACAUUACA   196

1.5 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget