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BaseInfo

ncRNA ID novel_zma_miR2193
Species Zea mays
Class miRNA
Genome position Chr5:72883740-72883811 [-]
Reference genome RefGen_v4
Source SRR1583941
Length 23
Mature sequence(if miRNA) 1 - AAAAAGGUGGGUGCGUUUGUCAG - 23
Stem-loop(if miRNA) --       U      G  C  C   A   A   UA
  GACAAAC UAUCUA CU UU CAU AAC CUU  U
  ||||||| |||||| || || ||| ||| |||  U
  CUGUUUG GUGGGU GA AA GUA UUG GAG  C
GA       C      G  A  A   C   -   UA
Stem-loop sequence GACAAACUUAUCUAGCUCUUCCAUAAACACUUUAUUCAUGAGGUUCAUGAAAAAGGUGGGUGCGUUUGUCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB169819.1
ncRNA:23   GACUGUUUGCGUGGGUGGAAAAA   1
  |||||||||||||||=|||||||
targets:125   CUGACAAACGCACCCGCCUUUUU   147

1.5 Sequence 7483 from Patent EP2559767 NA coding protein psRNATarget
HI409358.1
ncRNA:23   GACUGUUUGCGUGGGUGGAAAAA   1
  |||||||||||||||=|||||||
targets:125   CUGACAAACGCACCCGCCUUUUU   147

1.5 Sequence 7483 from Patent EP2074227 NA coding protein psRNATarget
LQ241488.1
ncRNA:23   GACUGUUUGCGUGGGUGGAAAAA   1
  |||||||||||||||=|||||||
targets:125   CUGACAAACGCACCCGCCUUUUU   147

1.5 Sequence 7483 from Patent EP2985353 NA coding protein psRNATarget