ncRNA ID | osa-miR5806 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:24708626-24708706 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 51 - ACAGGCAAAGACAAUGACGGC - 71 |
Stem-loop(if miRNA) |
GG    --      -    U GA  A   --GA     -AA U   GUCC  GAGCUG CAUU G  UU GCC    UCUGG   G U   ||||  |||||| |||| |  || |||    |||||   |   UAGG  CUCGGC GUAA C  AA CGG    AGAUU   C A UG    UU      A    - AG  A   ACAA     GAA G |
Stem-loop sequence | GGGUCCGAGCUGCAUUUGGAUUAGCCGAUCUGGAAGUUAGCAAGUUAGAAACAGGCAAAGACAAUGACGGCUCUUGGAUGU |
1 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |