ncRNA ID | novel_zma_miR2188 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:179919972-179920018 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089712;SRR2089715;SRR2287161;SRR5451005;SRR2089698 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AAAUUCAUAAGUAGAGAUUGUU - 22 |
Stem-loop(if miRNA) |
--        -    A CU        CAAUCUCU UUUA G  AUUUCA   |||||||| |||| |  |||||U   GUUAGAGA GAAU C  UAAAGG UU        U    A -U      |
Stem-loop sequence | CAAUCUCUUUUAAGCUAUUUCAUGGAAAUUCAUAAGUAGAGAUUGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU940875.1 |
|
1.0 | Zea mays clone 1165618 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_020552533.1 |
|
2.0 | PREDICTED: Zea mays uncharacterized LOC103655263 (LOC103655263), transcript variant X1, mRNA | NA | coding protein | psRNATarget |