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BaseInfo

ncRNA ID novel_zma_miR2186
Species Zea mays
Class miRNA
Genome position Chr3:197952347-197952429 [-]
Reference genome RefGen_v4
Source SRR2089712;SRR2089715;SRR2287031;SRR2287160;SRR5451004;SRR1997866;SRR5451006;SRR2089701;SRR2089703;SRR2089707;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - ACCUGGGACACUCGGCAAAGACGC - 24
Stem-loop(if miRNA) --U             C G      A        AC     U
   UCUUUGCCGAGUG U UCAGGU GACACUCG  AAAGG A
   ||||||||||||| | |||||| ||||||||  ||||| A
   AGAAACGGCUCAC A GGUCCA CUGUGAGC  UUUCC C
CGC             - G      -        CA     U
Stem-loop sequence UUCUUUGCCGAGUGCUGUCAGGUAGACACUCGACAAAGGUAACUCCUUUACCGAGUGUCACCUGGGACACUCGGCAAAGACGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU952231.1
ncRNA:24   CGCAGAAACGGCUCACAGGGUCCA   1
  ****|||||||||||||||*||||
targets:1444   AAUACUUUGCCGAGUGUCCAAGGU   1467

1.5 Zea mays clone 1234152 mRNA sequence NA coding protein psRNATarget