ncRNA ID | novel_zma_miR2184 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:213764840-213764966 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089712;SRR2089713;SRR2089714;SRR3341905 |
Length | 21 |
Mature sequence(if miRNA) | 107 - UUUUGUUAAUGUUUGGAGUAG - 127 |
Stem-loop(if miRNA) |
--                      G          UUUAAAAUC    G    -    GU  CCUGGUG   UUUUGUUAAUGUUUGGAGUAGC CCGUCAAAGG         UGCA UAGU CCUG  AG       G   |||||||||||||||||||||| ||||||||||         |||| |||| ||||  ||       C   AAAACAAUUACAAACCUCAUCG GGUAGUUUCU         GUGU GUCA GGGC  AC       U UU                      G          ---------    G    A    --  AAAGGUU |
Stem-loop sequence | UUUUGUUAAUGUUUGGAGUAGCGCCGUCAAAGGUUUAAAAUCUGCAGUAGUCCUGGUAGCCUGGUGGCUUUGGAAACACGGGAACUGGUGUGUCUUUGAUGGGGCUACUCCAAACAUUAACAAAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ089975.1 |
|
2.0 | TSA: Zea mays contig25621, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT084216.1 |
|
1.0 | Zea mays full-length cDNA clone ZM_BFb0090D11 mRNA, complete cds | NA | coding protein | psRNATarget |