ncRNA ID | novel_zma_miR2180 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:231667987-231668189 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089712;SRR2089714 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAGCUAGGCCGGCAUGAACGC - 21 |
Stem-loop(if miRNA) |
--         C    U A                  C           A    C                          U         A    AAU UC   UAGCUAGGC GGCA G ACGCCAACGCUUCCGCGC CGGAAACCCUA CCAC ACAUUUGUUUAGGUGCCGAUCACCUU UCCUACCCG UGAC   G  G   ||||||||| |||| | |||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||| ||||||||| ||||   |   AUCGAUCCG CCGU C UGCGGUUGCGAAGGCGCG GCCUUUGGGAU GGUG UGUAAACAAAUCCACGGCUAGUGGAA AGGAUGGGU ACUG   C  A UC         A    C C                  A           C    A                          C         C    -GC UU |
Stem-loop sequence | UAGCUAGGCCGGCAUGAACGCCAACGCUUCCGCGCCCGGAAACCCUAACCACCACAUUUGUUUAGGUGCCGAUCACCUUUUCCUACCCGAUGACAAUGUCGAUUCCGGUCACUGGGUAGGACAAGGUGAUCGGCACCUAAACAAAUGUAGUGGCUAGGGUUUCCGAGCGCGGAAGCGUUGGCGUCCCUGCCAGCCUAGCUACU |