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BaseInfo

ncRNA ID novel_zma_miR2180
Species Zea mays
Class miRNA
Genome position Chr3:231667987-231668189 [+]
Reference genome RefGen_v4
Source SRR2089712;SRR2089714
Length 21
Mature sequence(if miRNA) 1 - UAGCUAGGCCGGCAUGAACGC - 21
Stem-loop(if miRNA) --         C    U A                  C           A    C                          U         A    AAU UC
  UAGCUAGGC GGCA G ACGCCAACGCUUCCGCGC CGGAAACCCUA CCAC ACAUUUGUUUAGGUGCCGAUCACCUU UCCUACCCG UGAC   G  G
  ||||||||| |||| | |||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||| ||||||||| ||||   |
  AUCGAUCCG CCGU C UGCGGUUGCGAAGGCGCG GCCUUUGGGAU GGUG UGUAAACAAAUCCACGGCUAGUGGAA AGGAUGGGU ACUG   C  A
UC         A    C C                  A           C    A                          C         C    -GC UU
Stem-loop sequence UAGCUAGGCCGGCAUGAACGCCAACGCUUCCGCGCCCGGAAACCCUAACCACCACAUUUGUUUAGGUGCCGAUCACCUUUUCCUACCCGAUGACAAUGUCGAUUCCGGUCACUGGGUAGGACAAGGUGAUCGGCACCUAAACAAAUGUAGUGGCUAGGGUUUCCGAGCGCGGAAGCGUUGGCGUCCCUGCCAGCCUAGCUACU