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BaseInfo

ncRNA ID	novel_zma_miR2178
Species	Zea mays
Class	miRNA
Genome position	Chr3:19726459-19726546 [+]
Reference genome	RefGen_v4
Source	SRR2089712;SRR2089713;SRR2089714;SRR2089700
Length	21
Mature sequence(if miRNA)	1 - AUCGGAGAGGAUUGGAGGGGU - 21
Stem-loop(if miRNA)	--     A A                     CA  C       G   AUCGG G GGAUUGGAGGGGUUAAAAUCU  UC UUAUUUA A   ||||| | |||||||||||||||||||||  || |||||||   UGGCC C CCUGACCUCCCCGAUUUUAGG  AG AAUAAGU A UU     G C                     AG  A       U
Stem-loop sequence	AUCGGAGAGGAUUGGAGGGGUUAAAAUCUCAUCCUUAUUUAGAAUUGAAUAAAGAGAGGAUUUUAGCCCCUCCAGUCCCCGCCGGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ237950.1	ncRNA:21   UGGGGAGGUUAGGAGAGGCUA   1   =||||||=|||||*||||||| targets:204   GCCCCUCUAAUCCCCUCCGAU   224 Target Full Sequence	2.5	Sequence 3945 from Patent EP2985353	NA	coding protein	psRNATarget
JB166281.1	ncRNA:21   UGGGGAGGUUAGGAGAGGCUA   1   =||||||=|||||*||||||| targets:204   GCCCCUCUAAUCCCCUCCGAU   224 Target Full Sequence	2.5	Sequence 3945 from Patent EP2559767	NA	coding protein	psRNATarget
HI405820.1	ncRNA:21   UGGGGAGGUUAGGAGAGGCUA   1   =||||||=|||||*||||||| targets:204   GCCCCUCUAAUCCCCUCCGAU   224 Target Full Sequence	2.5	Sequence 3945 from Patent EP2074227	NA	coding protein	psRNATarget
XM_008664337.2	ncRNA:21   UGGGGAGGUUAGGAGAGGCUA   1   *=|=|||||||||||||||=| targets:2086   UUCUCUCCAAUCCUCUCCGGU   2106 Target Full Sequence	2.5	PREDICTED: Zea mays ABC transporter F family member 1 (LOC103640881), mRNA	NA	coding protein	psRNATarget