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BaseInfo

ncRNA ID	novel_zma_miR2164
Species	Zea mays
Class	miRNA
Genome position	Chr3:168485223-168485354 [+]
Reference genome	RefGen_v4
Source	SRR2089712;SRR2089715
Length	24
Mature sequence(if miRNA)	1 - AGAGACUGUUUUGGGAGCAAGUGA - 24
Stem-loop(if miRNA)	--     -C     U         U A   CA  U GAC    GA  C      C  -  -     CAU   AGAGA  UGUUU GGGAGCAAG G AUU  AG G   UGAG  GG UGUAAU UC UU CUAUU   U   |||||  ||||| ||||||||| | |||  || |   ||||  || |||||| || || |||||   UUUCU  ACAAA CCCUCGUUC C UAA  UC C   ACUC  CC AUAUUA AG AA GAUAA   U UA     UA     -         U A   UC  U AUA    -G  A      -  U  C     AUU
Stem-loop sequence	AGAGACUGUUUUGGGAGCAAGUGAAUUCAAGUGGACUGAGGAGGCUGUAAUCUCUUCUAUUCAUUUUUAAAUAGCAAUGAAUUAUAACCGCUCAAUACUCUCUAAUACUCUUGCUCCCAAACAAUUCUUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU965741.1	ncRNA:24   AGUGAACGAGGGUUUUGUCAGAGA   1   *|*=|||||||||||||||||*|* targets:1273   ACUUUUGCUCCCAAAACAGUCGCC   1296 Target Full Sequence	2.5	Zea mays clone 288431 mRNA sequence	NA	coding protein	psRNATarget
NM_001196873.1	ncRNA:24   AGUGAACGAGGGUUUUGUCAGAGA   1   *|*=|||||||||||||||||*|* targets:1303   ACUUUUGCUCCCAAAACAGUCGCC   1326 Target Full Sequence	2.5	Zea mays tRNA/rRNA methyltransferase (SpoU) family protein (LOC100502395), mRNA	NA	coding protein	psRNATarget
BT088000.1	ncRNA:24   AGUGAACGAGGGUUUUGUCAGAGA   1   *|*=|||||||||||||||||*|* targets:1303   ACUUUUGCUCCCAAAACAGUCGCC   1326 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0345M16 mRNA, complete cds	NA	coding protein	psRNATarget