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BaseInfo

ncRNA ID novel_zma_miR2158
Species Zea mays
Class miRNA
Genome position Chr2:7638892-7639088 [+]
Reference genome RefGen_v4
Source SRR2089712;SRR5451003;SRR5451004
Length 24
Mature sequence(if miRNA) 1 - AGUUAUUAAUUAAUUCUCGUCGGC - 24
Stem-loop(if miRNA) A   A   A   -             C    U --------  CGACGGGAAUUAACUGGGCCGACGGGAGUUAGUAAUUAAUUCCCGUCGGCCCUGCGUGGCC
 GUU UUA UUA AUUCUCGUCGGCC UGCG G        GC                                                             G
 ||| ||| ||| ||||||||||||| |||| |        ||                                                             A
 CCU UAA UUA UGAUUGAGGGCAG CCGG G        GG                                                             C
-   -   -   A             -    - UCAAUUAA  GCAGCCGGUGCGUCCCGGCUGCCCUUAAUUAAUGAUUGAGGGCAGCCGGGUCAAUUAAGGG
Stem-loop sequence AGUUAUUAAUUAAUUCUCGUCGGCCCUGCGUGGCCGACGGGAAUUAACUGGGCCGACGGGAGUUAGUAAUUAAUUCCCGUCGGCCCUGCGUGGCCGACGGGAAUUAACUGGGCCGACGGGAGUUAGUAAUUAAUUCCCGUCGGCCCUGCGUGGCCGACGGGAAUUAACUGGGCCGACGGGAGUUAGUAAUUAAUUCC