ncRNA ID | novel_zma_miR2151 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:10174744-10174844 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089712;SRR2287031;SRR2287159;SRR2287162;SRR2287163;SRR4237225;SRR5451006;SRR2089698;SRR2089699;SRR2089700;SRR2089701;SRR2089703;SRR2089704;SRR2089705;SRR2089707 |
Length | 21 |
Mature sequence(if miRNA) | 1 - GCUUUAAGAUUGAUGGGGUGG - 21 |
Stem-loop(if miRNA) |
--                               A   UAAAGCAAUAGAAC   ACCCCAUCAAUCUUAAAGUAAUAGAACACCG UCU              A   ||||||||||||||||||||||||||||||| |||   UGGGGUAGUUAGAAUUUCGUUGUCUUGUGGC UCG              G GG                               -   GUGAAGAGACGUCC |
Stem-loop sequence | ACCCCAUCAAUCUUAAAGUAAUAGAACACCGAUCUUAAAGCAAUAGAACAGCCUGCAGAGAAGUGGCUCGGUGUUCUGUUGCUUUAAGAUUGAUGGGGUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020547872.1 |
|
1.0 | PREDICTED: Zea mays accumulation of photosystem one1 (LOC100383040), transcript variant X4, mRNA | NA | coding protein | psRNATarget | |||||||||
EU970586.1 |
|
3.0 | Zea mays clone 347628 cytochrome P450 CYP76M15 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
XM_008663570.2 |
|
3.0 | PREDICTED: Zea mays cytochrome P450 76M5-like (LOC103640554), mRNA | NA | coding protein | psRNATarget |