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BaseInfo

ncRNA ID	novel_zma_miR2144
Species	Zea mays
Class	miRNA
Genome position	Chr2:29336262-29336436 [-]
Reference genome	RefGen_v4
Source	SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR2287159;SRR2287161;SRR2287165;SRR5451003;SRR5451004;SRR1997866;SRR5451005;SRR2089700;SRR2089704;SRR2089706
Length	24
Mature sequence(if miRNA)	152 - AGUUUUGCACUACAAGAAAGUCGG - 175
Stem-loop(if miRNA)	--  U          A                      GU       -AU      GGUG G       U A           GACUUUU   AG UUUGCACUAC AGAAAGUCGGCUUUUAGAAAAA  UGUUUCC   AUUCAG    U UUUGGUU G CUUUUGGCUUU       G   || |||||||||| ||||||||||||||||||||||  |||||||   ||||||    | ||||||| | |||||||||||   UC AAACGUGAUG UCUUUCAGCCGAAAAUCUUUUU  ACGAAGG   UAGGUC    G AAACCAA C GAAAACCGAAA       C AG  U          C                      UG       AUC      ---G G       C -           AUCCCCC
Stem-loop sequence	AGUUUUGCACUACAAGAAAGUCGGCUUUUAGAAAAAGUUGUUUCCAUAUUCAGGGUGUGUUUGGUUUGACUUUUGGCUUUGACUUUUGCCCCCCUAAAAGCCAAAAGCCAACCAAAGGGCUGGAUCUAGGAAGCAGUUUUUUCUAAAAGCCGACUUUCUCGUAGUGCAAAUCUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU953838.1	ncRNA:24   GGCUGAAAGAACAUCACGUUUUGA   1   |=||||||=||||||||||||||| targets:1271   CUGACUUUUUUGUAGUGCAAAACU   1294 Target Full Sequence	1.0	Zea mays clone 1447397 diacylglycerol O-acyltransferase 1 mRNA, complete cds	NA	coding protein	psRNATarget
EU945925.1	ncRNA:24   GGCUGAAAGAACAUCACGUUUUGA   1   ||||||||||*||||||||||||| targets:690   CCGACUUUCUCGUAGUGCAAAACU   713 Target Full Sequence	1.0	Zea mays clone 290258 mRNA sequence	NA	coding protein	psRNATarget
NM_001150116.1	ncRNA:24   GGCUGAAAGAACAUCACGUUUUGA   1   ||||||||||*||||||||||||| targets:761   CCGACUUUCUCGUAGUGCAAAACU   784 Target Full Sequence	1.0	Zea mays uncharacterized LOC100276292 (umc2168), mRNA	NA	coding protein	psRNATarget
EU961185.1	ncRNA:24   GGCUGAAAGAACAUCACGUUUUGA   1   ||||||||||*||||||||||||| targets:761   CCGACUUUCUCGUAGUGCAAAACU   784 Target Full Sequence	1.0	Zea mays clone 233237 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT061539.1	ncRNA:24   GGCUGAAAGAACAUCACGUUUUGA   1   ||||||||||*||||||||||||| targets:1050   CCGACUUUCUCGUAGUGCAAAACU   1073 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0156G14 mRNA, complete cds	NA	coding protein	psRNATarget
BT084875.2	ncRNA:24   GGCUGAAAGAACAUCACGUUUUGA   1   |=|**|*|=||||||||||||||| targets:259   CUGCAUGUUUUGUAGUGCAAAACU   282 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0198N23 mRNA, complete cds	NA	coding protein	psRNATarget