ncRNA ID | osa-miR438 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:20745965-20746150 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 24 - UUCCCACGCGUUAUAGUGAAA - 44 |
Stem-loop(if miRNA) |
    U UUUU   CAAACU  UUU            U                  -     UG  AUG   GUAU   --  AUUGAUAUUGGAUCU AACG G    GGG      UG   UCCCACGCGUUA AGUGAAAACUUUUGGAAU AUGUU  UU   GGA    AUA  UU               A |||| |    |||      ||   |||||||||||| |||||||||||||||||| |||||  ||   |||    |||  ||               G UUGC C    CCU      AC   AGGGUGCGCAAU UCACUUUUGAAAACUUUG UACAG  GG   UUG    UGU  AA               A     - ---U   UCAUCU  UAU            U                  G     GU  GCA   ----   GC  UAUAUUUUAAUACGA |
Stem-loop sequence | AACGUGUUUUGGGCAAACUUGUUUUCCCACGCGUUAUAGUGAAAACUUUUGGAAUAUGUUUGUUAUGGGAGUAUAUAUUAUUGAUAUUGGAUCUAGAAGCAUAAUUUUAUAUAACGUGUGUUACGGGUGGACAUGGUUUCAAAAGUUUUCACUUUAACGCGUGGGAUAUCAUCUACUUCCUCCGUU |
1 | PMID:15805478
"Cloning and characterization of microRNAs from rice"; Sunkar R, Girke T, Jain PK, Zhu JK; Plant Cell. 17:1397-1411(2005). |