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BaseInfo

ncRNA ID	novel_zma_miR2131
Species	Zea mays
Class	miRNA
Genome position	Chr2:85355644-85355700 [-]
Reference genome	RefGen_v4
Source	SRR2089712;SRR5099742
Length	24
Mature sequence(if miRNA)	1 - UUUUGUCGGGCACUCAGCAAAGAA - 24
Stem-loop(if miRNA)	--      C            CUUU  C   CUUUGU GAGUGCUCGACG    GC G   |||||| ||||||||||||    || A   GAAACG CUCACGGGCUGU    CG A AA      A            UUUU  U
Stem-loop sequence	CUUUGUCGAGUGCUCGACGCUUUGCCGAAUGCUUUUUGUCGGGCACUCAGCAAAGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654495.2	ncRNA:24   AAGAAACGACUCACGGGCUGUUUU   1   ||||||||*||||||||||||||| targets:16   UUCUUUGCCGAGUGCCCGACAAAA   39 Target Full Sequence	1.0	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget
XM_020545810.1	ncRNA:24   AAGAAACGACUCACGGGCUGUUUU   1   ||=||||=*||||||||||||||| targets:330   UUUUUUGUCGAGUGCCCGACAAAA   353 Target Full Sequence	2.0	PREDICTED: Zea mays zinc finger BED domain-containing protein RICESLEEPER 2-like (LOC109943047), mRNA	NA	coding protein	psRNATarget
BT055423.1	ncRNA:24   AAGAAACGACUCACGGGCUGUUUU   1   ||||||||*||||||||||*|||| targets:145   UUCUUUGCCGAGUGCCCGAAAAAA   168 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0179M04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001165647.1	ncRNA:24   AAGAAACGACUCACGGGCUGUUUU   1   ||||||||*||||||||||*|||| targets:145   UUCUUUGCCGAGUGCCCGAAAAAA   168 Target Full Sequence	2.5	Zea mays uncharacterized LOC100304195 (LOC100304195), mRNA	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:24   AAGAAACGACUCACGGGCUGUUUU   1   ||||||||*||||||||||*|||| targets:2164   UUCUUUGCCGAGUGCCCGAAAAAA   2187 Target Full Sequence	2.5	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget
BT054268.1	ncRNA:24   AAGAAACGACUCACGGGCUGUUUU   1   ||||||||*||||||||||*|||| targets:2164   UUCUUUGCCGAGUGCCCGAAAAAA   2187 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008671736.2	ncRNA:24   AAGAAACGACUCACGGGCUGUUUU   1   **||||||*||||||||||||||| targets:253   GACUUUGCCGAGUGCCCGACAAAA   276 Target Full Sequence	1.0	PREDICTED: Zea mays probable serine/threonine-protein kinase PBL28 (LOC103647166), mRNA	NA	coding protein	psRNATarget
XM_008665918.2	ncRNA:24   AAGAAACGACUCACGGGCUGUUUU   1   *|**||||||=||||=|||||||| targets:679   AUGCUUGCUGGGUGCUCGACAAAA   702 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103642707 (LOC103642707), mRNA	NA	coding protein	psRNATarget
BT085013.1	ncRNA:24   AAGAAACGACUCACGGGCUGUUUU   1   *|**||||||=||||=|||||||| targets:619   AUGCUUGCUGGGUGCUCGACAAAA   642 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0226L21 mRNA, complete cds	NA	coding protein	psRNATarget
EU967793.1	ncRNA:24   AAGAAACGACUCACGGGCUGUUUU   1   *|**||||||=||||=|||||||| targets:684   AUGCUUGCUGGGUGCUCGACAAAA   707 Target Full Sequence	2.5	Zea mays clone 306108 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget