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BaseInfo

ncRNA ID novel_zma_miR2127
Species Zea mays
Class miRNA
Genome position Chr2:132435725-132435850 [-]
Reference genome RefGen_v4
Source SRR2089712
Length 24
Mature sequence(if miRNA) 103 - GGUGGACCGGGAAAUAGAGGGGAU - 126
Stem-loop(if miRNA) --       CG      A               ----      CUUUUAU  UCUAGUUAUCCUUGCU
  GGUGGAC  GGAAAU GAGGGGAUCCAUGGG    GGAUCC       AC                A
  |||||||  |||||| |||||||||||||||    ||||||       ||
  CCACCUG  CCUUUA CUCCCCUAGGUACCC    CCUAGG       GA                U
AA       UA      C               UCUC      ------U  ACAAUAAGUUUUAACU
Stem-loop sequence GGUGGACCGGGAAAUAGAGGGGAUCCAUGGGGGAUCCCUUUUAUACUCUAGUUAUCCUUGCUAUUCAAUUUUGAAUAACAAGUGGAUCCCUCUCCCAUGGAUCCCCUCCAUUUCCAUGUCCACCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ111179.1
ncRNA:24   UAGGGGAGAUAAAGGGCCAGGUGG   1
  |*|=||||||*|||||*|||||||
targets:147   ACCUCCUCUACUUCCCCGUCCACC   170

2.5 TSA: Zea mays contig46840, mRNA sequence NA coding protein psRNATarget