ncRNA ID | novel_zma_miR2127 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:132435725-132435850 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089712 |
Length | 24 |
Mature sequence(if miRNA) | 103 - GGUGGACCGGGAAAUAGAGGGGAU - 126 |
Stem-loop(if miRNA) |
--       CG      A               ----      CUUUUAU  UCUAGUUAUCCUUGCU   GGUGGAC  GGAAAU GAGGGGAUCCAUGGG    GGAUCC       AC                A   |||||||  |||||| |||||||||||||||    ||||||       ||   CCACCUG  CCUUUA CUCCCCUAGGUACCC    CCUAGG       GA                U AA       UA      C               UCUC      ------U  ACAAUAAGUUUUAACU |
Stem-loop sequence | GGUGGACCGGGAAAUAGAGGGGAUCCAUGGGGGAUCCCUUUUAUACUCUAGUUAUCCUUGCUAUUCAAUUUUGAAUAACAAGUGGAUCCCUCUCCCAUGGAUCCCCUCCAUUUCCAUGUCCACCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ111179.1 |
|
2.5 | TSA: Zea mays contig46840, mRNA sequence | NA | coding protein | psRNATarget |