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BaseInfo

ncRNA ID novel_zma_miR2125
Species Zea mays
Class miRNA
Genome position Chr4:197140215-197140436 [+]
Reference genome RefGen_v4
Source SRR1583944;SRR2647221;SRR2647391
Length 24
Mature sequence(if miRNA) 1 - AAAAGAUUCUCCUGUGUAAACAUG - 24
Stem-loop(if miRNA) --     A    C                     C                                                ----A   G CACCGCACCAGAUUACCAGG
  AAAAG UUCU CUGUGUAAACAUGCUAAAACG CUUAACAACCUUUGGAUCCAGAAUCAAAGGCUAAUUUUAAUCCCACCU     ACC C                    A
  ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     ||| |                    G
  UUUUC AAGA GACACAUUUGUACGAUUUUGC GAAUUGUUGGAAAUCUAGGUCUUAGUUUCCGAUUAGAAUUAGGGUGGA     AGA A                    G
CA     C    A                     A                                                CUAUU   - CACAAAAAAGAUUUCUUGGG
Stem-loop sequence AAAAGAUUCUCCUGUGUAAACAUGCUAAAACGCCUUAACAACCUUUGGAUCCAGAAUCAAAGGCUAAUUUUAAUCCCACCUAACCGCCACCGCACCAGAUUACCAGGAGGGGGUUCUUUAGAAAAAACACAAGAUUAUCAGGUGGGAUUAAGAUUAGCCUUUGAUUCUGGAUCUAAAGGUUGUUAAGACGUUUUAGCAUGUUUACACAGAAGAACCUUUUAC