ncRNA ID | novel_zma_miR2125 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:197140215-197140436 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944;SRR2647221;SRR2647391 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAAGAUUCUCCUGUGUAAACAUG - 24 |
Stem-loop(if miRNA) |
--     A    C                     C                                                ----A   G CACCGCACCAGAUUACCAGG   AAAAG UUCU CUGUGUAAACAUGCUAAAACG CUUAACAACCUUUGGAUCCAGAAUCAAAGGCUAAUUUUAAUCCCACCU     ACC C                    A   ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     ||| |                    G   UUUUC AAGA GACACAUUUGUACGAUUUUGC GAAUUGUUGGAAAUCUAGGUCUUAGUUUCCGAUUAGAAUUAGGGUGGA     AGA A                    G CA     C    A                     A                                                CUAUU   - CACAAAAAAGAUUUCUUGGG |
Stem-loop sequence | AAAAGAUUCUCCUGUGUAAACAUGCUAAAACGCCUUAACAACCUUUGGAUCCAGAAUCAAAGGCUAAUUUUAAUCCCACCUAACCGCCACCGCACCAGAUUACCAGGAGGGGGUUCUUUAGAAAAAACACAAGAUUAUCAGGUGGGAUUAAGAUUAGCCUUUGAUUCUGGAUCUAAAGGUUGUUAAGACGUUUUAGCAUGUUUACACAGAAGAACCUUUUAC |