ncRNA ID | novel_zma_miR2118 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:194307103-194307179 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 54 - AUAAUCUGGGUAUAUUAUAAUUCC - 77 |
Stem-loop(if miRNA) |
--         C GU              ----    AUU   GAUUAUAAU U  CCAGAUUAUAUAAU    GAGU   A   ||||||||| |  ||||||||||||||    ||||   G   UUAAUAUUA A  GGUCUAAUAUAUUA    UUCA   U CC         U UG              GGUU    AUU |
Stem-loop sequence | GAUUAUAAUCUGUCCAGAUUAUAUAAUGAGUAUUAGUUUAACUUUUGGAUUAUAUAAUCUGGGUAUAUUAUAAUUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020548752.1 |
|
1.5 | PREDICTED: Zea mays putative disease resistance RPP13-like protein 1 (LOC109939242), mRNA | NA | coding protein | psRNATarget | |||||||||
BT069856.2 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFb0305N24 mRNA, complete cds | NA | coding protein | psRNATarget |