| ncRNA ID | osa-miR5836 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr6:17701867-17701955 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 59 - UGAGCAGCCGGACCAUGGGAU - 79 |
| Stem-loop(if miRNA) |
UUACGAG A -C GACCAUGGGAUAUUCAGGCACUCCUG GCAUG GCAGC G G ||||| ||||| | UGUAC CGUCG G U -----AA - AU UCAUCUCCGGUAAUCCUUACACUUUG |
| Stem-loop sequence | UUACGAGGCAUGAGCAGCCGGACCAUGGGAUAUUCAGGCACUCCUGGUGUUUCACAUUCCUAAUGGCCUCUACUGUAGCUGCCAUGUAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_015769771.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630 (LOC4331246), mRNA | inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630(LOC4331246) | coding protein | psRNATarget |
| 1 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |