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BaseInfo

ncRNA ID	novel_zma_miR2106
Species	Zea mays
Class	miRNA
Genome position	Chr2:212693663-212693756 [-]
Reference genome	RefGen_v4
Source	SRR2089711
Length	24
Mature sequence(if miRNA)	1 - AAAGAAACGGAGGGAGUACUACUA - 24
Stem-loop(if miRNA)	--UA            A              A            CAA     GGUACUCCCUCC UUUCUUUUUAUUUG CGCUGGAUAGUG   A     |||||||||||| |||||||||||||| ||||||||||||     UCAUGAGGGAGG AAAGAAAAAUAAAC GCGACCUAUCAC   A AUCA            C              A            AUU
Stem-loop sequence	UAGGUACUCCCUCCAUUUCUUUUUAUUUGACGCUGGAUAGUGCAAAAUUACACUAUCCAGCGACAAAUAAAAAGAAACGGAGGGAGUACUACUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT054612.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   **||||||||||=||||||||||| targets:1358   CUGUAGUACUCCUUCCGUUUCUUU   1381 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0190P19 mRNA, complete cds	NA	coding protein	psRNATarget
HI408623.1	ncRNA:24   AUCA-UCAUGAGGGAGG-CAAAGAAA   1   ||||-||||||||||||-|||||||| targets:1   UAGUUAGUACUCCCUCCAGUUUCUUU   26 Target Full Sequence	3.0	Sequence 6748 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240753.1	ncRNA:24   AUCA-UCAUGAGGGAGG-CAAAGAAA   1   ||||-||||||||||||-|||||||| targets:1   UAGUUAGUACUCCCUCCAGUUUCUUU   26 Target Full Sequence	3.0	Sequence 6748 from Patent EP2985353	NA	coding protein	psRNATarget
JB169084.1	ncRNA:24   AUCA-UCAUGAGGGAGG-CAAAGAAA   1   ||||-||||||||||||-|||||||| targets:1   UAGUUAGUACUCCCUCCAGUUUCUUU   26 Target Full Sequence	3.0	Sequence 6748 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235409.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   *|*||||||||||||||||||||| targets:5   AAUUAGUACUCCCUCCGUUUCUUU   28 Target Full Sequence	0.0	Sequence 1404 from Patent EP2985353	NA	coding protein	psRNATarget
JB163740.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   *|*||||||||||||||||||||| targets:5   AAUUAGUACUCCCUCCGUUUCUUU   28 Target Full Sequence	0.0	Sequence 1404 from Patent EP2559767	NA	coding protein	psRNATarget
HI403279.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   *|*||||||||||||||||||||| targets:5   AAUUAGUACUCCCUCCGUUUCUUU   28 Target Full Sequence	0.0	Sequence 1404 from Patent EP2074227	NA	coding protein	psRNATarget
EZ112557.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   |=|*=||||||||||||||||||| targets:42   UGGAGGUACUCCCUCCGUUUCUUU   65 Target Full Sequence	0.0	TSA: Zea mays contig48218, mRNA sequence	NA	coding protein	psRNATarget
XM_008664463.2	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   ||-||||||||||||=|||||||| targets:88   UA-UAGUACUCCCUCUGUUUCUUU   110 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008664460.2	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   ||-||||||||||||=|||||||| targets:108   UA-UAGUACUCCCUCUGUUUCUUU   130 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020537567.1	ncRNA:24   AUCA-UCAUGAGGGAGGCAAAGAAA   1   ||||-|*|||||||||||||||||| targets:1445   UAGUUAUUACUCCCUCCGUUUCUUU   1469 Target Full Sequence	1.0	PREDICTED: Zea mays MADS2 (zmm2), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU964901.1	ncRNA:24   AUCA--UCAUGAGGGAGGCAAAGAAA   1   |*||--|||||||||||||||||||| targets:489   UUGUUAAGUACUCCCUCCGUUUCUUU   514 Target Full Sequence	0.0	Zea mays clone 282450 mRNA sequence	NA	coding protein	psRNATarget
NM_001151882.1	ncRNA:24   AUCA--UCAUGAGGGAGGCAAAGAAA   1   |*||--|||||||||||||||||||| targets:561   UUGUUAAGUACUCCCUCCGUUUCUUU   586 Target Full Sequence	0.0	Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA	NA	coding protein	psRNATarget
EU974849.1	ncRNA:24   AUCA--UCAUGAGGGAGGCAAAGAAA   1   |*||--|||||||||||||||||||| targets:561   UUGUUAAGUACUCCCUCCGUUUCUUU   586 Target Full Sequence	0.0	Zea mays clone 459794 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
HI403401.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   |*|||*|||||||||||||||||| targets:5   UUGUAUUACUCCCUCCGUUUCUUU   28 Target Full Sequence	1.0	Sequence 1526 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235531.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   |*|||*|||||||||||||||||| targets:5   UUGUAUUACUCCCUCCGUUUCUUU   28 Target Full Sequence	1.0	Sequence 1526 from Patent EP2985353	NA	coding protein	psRNATarget
JB163862.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   |*|||*|||||||||||||||||| targets:5   UUGUAUUACUCCCUCCGUUUCUUU   28 Target Full Sequence	1.0	Sequence 1526 from Patent EP2559767	NA	coding protein	psRNATarget
EZ517015.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   ||-|=|||||||||||||||=||| targets:51   UA-UGGUACUCCCUCCGUUUUUUU   73 Target Full Sequence	1.5	TSA: Zea mays cultivar W22 CL412Contig1.betc, mRNA sequence	NA	coding protein	psRNATarget
JB169406.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   *|||||||||||||||||||| targets:1   AAGUACUCCCUCCGUUUCUUU   21 Target Full Sequence	0.0	Sequence 7070 from Patent EP2559767	NA	coding protein	psRNATarget
JB170422.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   *|||||||||||||||||||| targets:1   AAGUACUCCCUCCGUUUCUUU   21 Target Full Sequence	0.0	Sequence 8086 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241075.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   *|||||||||||||||||||| targets:1   AAGUACUCCCUCCGUUUCUUU   21 Target Full Sequence	0.0	Sequence 7070 from Patent EP2985353	NA	coding protein	psRNATarget
HI408945.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   *|||||||||||||||||||| targets:1   AAGUACUCCCUCCGUUUCUUU   21 Target Full Sequence	0.0	Sequence 7070 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242091.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   *|||||||||||||||||||| targets:1   AAGUACUCCCUCCGUUUCUUU   21 Target Full Sequence	0.0	Sequence 8086 from Patent EP2985353	NA	coding protein	psRNATarget
HI409961.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   *|||||||||||||||||||| targets:1   AAGUACUCCCUCCGUUUCUUU   21 Target Full Sequence	0.0	Sequence 8086 from Patent EP2074227	NA	coding protein	psRNATarget
XM_008656936.2	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   *|**|||||||||||||||||||| targets:158   GAAAAGUACUCCCUCCGUUUCUUU   181 Target Full Sequence	0.0	PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT037092.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   ||-|||||||||*||||||||||| targets:1079   UA-UAGUACUCCAUCCGUUUCUUU   1101 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001143050.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   ||-|||||||||*||||||||||| targets:1079   UA-UAGUACUCCAUCCGUUUCUUU   1101 Target Full Sequence	1.5	Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA	NA	coding protein	psRNATarget
XM_020542418.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   ||-||*|||||||||||||||||| targets:1972   UA-UACUACUCCCUCCGUUUCUUU   1994 Target Full Sequence	1.0	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008658752.2	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   ||-||*|||||||||||||||||| targets:2039   UA-UACUACUCCCUCCGUUUCUUU   2061 Target Full Sequence	1.0	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546615.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   |=*||*|||||||||||||||||| targets:2790   UGCUAUUACUCCCUCCGUUUCUUU   2813 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020546614.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   |=*||*|||||||||||||||||| targets:2807   UGCUAUUACUCCCUCCGUUUCUUU   2830 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546612.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   |=*||*|||||||||||||||||| targets:2913   UGCUAUUACUCCCUCCGUUUCUUU   2936 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020544903.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   ||-|||||||||*||||||||||| targets:3136   UA-UAGUACUCCAUCCGUUUCUUU   3158 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020544902.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   ||-|||||||||*||||||||||| targets:3145   UA-UAGUACUCCAUCCGUUUCUUU   3167 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546613.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   |=*||*|||||||||||||||||| targets:3692   UGCUAUUACUCCCUCCGUUUCUUU   3715 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EZ058532.1	ncRNA:24   AU-CAUCAUGAGGGAGGCAAAGAAA   1   ||-||=*|||||||||=|||||||| targets:263   UACGUGCUACUCCCUCUGUUUCUUU   287 Target Full Sequence	2.5	TSA: Zea mays contig59654, mRNA sequence	NA	coding protein	psRNATarget
EU955357.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   *=|*|||||||||||||||||||* targets:1242   CGGAAGUACUCCCUCCGUUUCUUC   1265 Target Full Sequence	1.0	Zea mays clone 1529261 senescence-inducible chloroplast stay-green protein 1 mRNA, complete cds; nuclear gene for chloroplast product	NA	coding protein	psRNATarget
NM_001112301.2	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   *=|*|||||||||||||||||||* targets:1304   CGGAAGUACUCCCUCCGUUUCUUC   1327 Target Full Sequence	1.0	Zea mays senescence-inducible chloroplast stay-green protein 2 (SGR2), mRNA	NA	coding protein	psRNATarget
XM_008674191.2	ncRNA:24   AUCAUC-AUGAGGGAGGCAAAGAAA   1   |=*|=|-|||||||||||||||||| targets:1144   UGUUGGAUACUCCCUCCGUUUCUUU   1168 Target Full Sequence	2.0	PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA	NA	coding protein	psRNATarget
LQ239400.1	ncRNA:23   UCAUCAUGAGGGAGGCAAAGAAA   1   |*|*||||||||||||||||||| targets:1   AUUUGUACUCCCUCCGUUUCUUU   23 Target Full Sequence	0.0	Sequence 5395 from Patent EP2985353	NA	coding protein	psRNATarget
HI407270.1	ncRNA:23   UCAUCAUGAGGGAGGCAAAGAAA   1   |*|*||||||||||||||||||| targets:1   AUUUGUACUCCCUCCGUUUCUUU   23 Target Full Sequence	0.0	Sequence 5395 from Patent EP2074227	NA	coding protein	psRNATarget
JB167731.1	ncRNA:23   UCAUCAUGAGGGAGGCAAAGAAA   1   |*|*||||||||||||||||||| targets:1   AUUUGUACUCCCUCCGUUUCUUU   23 Target Full Sequence	0.0	Sequence 5395 from Patent EP2559767	NA	coding protein	psRNATarget
JB163755.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   *||*|*|||||||||||||||||| targets:5   GAGAACUACUCCCUCCGUUUCUUU   28 Target Full Sequence	1.0	Sequence 1419 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235424.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   *||*|*|||||||||||||||||| targets:5   GAGAACUACUCCCUCCGUUUCUUU   28 Target Full Sequence	1.0	Sequence 1419 from Patent EP2985353	NA	coding protein	psRNATarget
HI403294.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   *||*|*|||||||||||||||||| targets:5   GAGAACUACUCCCUCCGUUUCUUU   28 Target Full Sequence	1.0	Sequence 1419 from Patent EP2074227	NA	coding protein	psRNATarget
EU973473.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   *|*|*||||||||||||||||||| targets:643   AACUUGUACUCCCUCCGUUUCUUU   666 Target Full Sequence	0.0	Zea mays clone 399411 mRNA sequence	NA	coding protein	psRNATarget
BT062074.1	ncRNA:24   AU-C-AUCAUGAGGGAGGCAAAGAAA   1   ||-|-||*|||||||||||||||||| targets:1129   UACGCUACUACUCCCUCCGUUUCUUU   1154 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0212O02 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008682276.2	ncRNA:24   AU-C-AUCAUGAGGGAGGCAAAGAAA   1   ||-|-||*|||||||||||||||||| targets:1212   UACGCUACUACUCCCUCCGUUUCUUU   1237 Target Full Sequence	1.0	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU973774.1	ncRNA:24   AU-C-AUCAUGAGGGAGGCAAAGAAA   1   ||-|-||*|||||||||||||||||| targets:1227   UACGCUACUACUCCCUCCGUUUCUUU   1252 Target Full Sequence	1.0	Zea mays clone 410704 F-box domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008682289.2	ncRNA:24   AU-C-AUCAUGAGGGAGGCAAAGAAA   1   ||-|-||*|||||||||||||||||| targets:1241   UACGCUACUACUCCCUCCGUUUCUUU   1266 Target Full Sequence	1.0	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_008647346.2	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   *|*||*|||||||||||||||||| targets:135   AAUUAAUACUCCCUCCGUUUCUUU   158 Target Full Sequence	1.0	PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA	NA	coding protein	psRNATarget
NM_001158647.2	ncRNA:24   AU-C-AUCAUGAGGGAGGCAAAGAAA   1   ||-|-||*|||||||||||||||||| targets:1293   UACGCUACUACUCCCUCCGUUUCUUU   1318 Target Full Sequence	1.0	Zea mays F-box domain containing protein (LOC100285757), mRNA	NA	coding protein	psRNATarget
EU973763.1	ncRNA:24   AU-C-AUCAUGAGGGAGGCAAAGAAA   1   ||-|-||*|||||||||||||||||| targets:1295   UACGCUACUACUCCCUCCGUUUCUUU   1320 Target Full Sequence	1.0	Zea mays clone 409560 F-box domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008682282.2	ncRNA:24   AU-C-AUCAUGAGGGAGGCAAAGAAA   1   ||-|-||*|||||||||||||||||| targets:1401   UACGCUACUACUCCCUCCGUUUCUUU   1426 Target Full Sequence	1.0	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT024153.1	ncRNA:24   AUCA-U-CAUGAGGGAGGCAAAGAAA   1   |*||-|-||||||||||||||||||| targets:182   UUGUCACGUACUCCCUCCGUUUCUUU   207 Target Full Sequence	2.0	Zea mays clone EL01N0438E01 mRNA sequence	NA	coding protein	psRNATarget
NM_001148943.2	ncRNA:24   AUC--A--UC-AUGAGGGAGGCAAAGAAA   1   |||--|--||-|||||||||||||||||| targets:1532   UAGGAUGAAGAUACUCCCUCCGUUUCUUU   1560 Target Full Sequence	2.0	Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA	NA	coding protein	psRNATarget
XM_008669400.2	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   *|||**|||||||||||||||||| targets:1594   CAGUUAUACUCCCUCCGUUUCUUU   1617 Target Full Sequence	1.0	PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020553332.1	ncRNA:24   AU-C-AUCAUGAGGGAGGCAAAGAAA   1   ||-|-||*|||||||||||||||||| targets:1990   UACGCUACUACUCCCUCCGUUUCUUU   2015 Target Full Sequence	1.0	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020553342.1	ncRNA:24   AU-C-AUCAUGAGGGAGGCAAAGAAA   1   ||-|-||*|||||||||||||||||| targets:2021   UACGCUACUACUCCCUCCGUUUCUUU   2046 Target Full Sequence	1.0	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020553327.1	ncRNA:24   AU-C-AUCAUGAGGGAGGCAAAGAAA   1   ||-|-||*|||||||||||||||||| targets:2103   UACGCUACUACUCCCUCCGUUUCUUU   2128 Target Full Sequence	1.0	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020553339.1	ncRNA:24   AU-C-AUCAUGAGGGAGGCAAAGAAA   1   ||-|-||*|||||||||||||||||| targets:2134   UACGCUACUACUCCCUCCGUUUCUUU   2159 Target Full Sequence	1.0	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X5, mRNA	NA	coding protein	psRNATarget
LQ240700.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   ||*|||||||||||||||||| targets:1   UACUACUCCCUCCGUUUCUUU   21 Target Full Sequence	1.0	Sequence 6695 from Patent EP2985353	NA	coding protein	psRNATarget
HI408570.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   ||*|||||||||||||||||| targets:1   UACUACUCCCUCCGUUUCUUU   21 Target Full Sequence	1.0	Sequence 6695 from Patent EP2074227	NA	coding protein	psRNATarget
JB169031.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   ||*|||||||||||||||||| targets:1   UACUACUCCCUCCGUUUCUUU   21 Target Full Sequence	1.0	Sequence 6695 from Patent EP2559767	NA	coding protein	psRNATarget
JB163817.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   |**|*||||||||||||||||||| targets:5   UCUUCGUACUCCCUCCGUUUCUUU   28 Target Full Sequence	0.0	Sequence 1481 from Patent EP2559767	NA	coding protein	psRNATarget
HI403356.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   |**|*||||||||||||||||||| targets:5   UCUUCGUACUCCCUCCGUUUCUUU   28 Target Full Sequence	0.0	Sequence 1481 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235486.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   |**|*||||||||||||||||||| targets:5   UCUUCGUACUCCCUCCGUUUCUUU   28 Target Full Sequence	0.0	Sequence 1481 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008671993.2	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   |**||*|||||||||||||||||| targets:1160   UCAUAUUACUCCCUCCGUUUCUUU   1183 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA	NA	coding protein	psRNATarget
NM_001156655.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   ***||*|||||||||||||||||| targets:1282   CUCUAAUACUCCCUCCGUUUCUUU   1305 Target Full Sequence	1.0	Zea mays wax synthase (LOC100283756), mRNA	NA	coding protein	psRNATarget
EU965844.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   ***||*|||||||||||||||||| targets:1282   CUCUAAUACUCCCUCCGUUUCUUU   1305 Target Full Sequence	1.0	Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008671992.2	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   |**||*|||||||||||||||||| targets:1266   UCAUAUUACUCCCUCCGUUUCUUU   1289 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008677073.2	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   ***||*|||||||||||||||||| targets:1521   GCCUACUACUCCCUCCGUUUCUUU   1544 Target Full Sequence	1.0	PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA	NA	coding protein	psRNATarget
JB170657.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   **||||||||||||||||||| targets:1   AUGUACUCCCUCCGUUUCUUU   21 Target Full Sequence	0.0	Sequence 8321 from Patent EP2559767	NA	coding protein	psRNATarget
JB169171.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   **||||||||||||||||||| targets:1   AUGUACUCCCUCCGUUUCUUU   21 Target Full Sequence	0.0	Sequence 6835 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242326.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   **||||||||||||||||||| targets:1   AUGUACUCCCUCCGUUUCUUU   21 Target Full Sequence	0.0	Sequence 8321 from Patent EP2985353	NA	coding protein	psRNATarget
HI408710.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   **||||||||||||||||||| targets:1   AUGUACUCCCUCCGUUUCUUU   21 Target Full Sequence	0.0	Sequence 6835 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240840.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   **||||||||||||||||||| targets:1   AUGUACUCCCUCCGUUUCUUU   21 Target Full Sequence	0.0	Sequence 6835 from Patent EP2985353	NA	coding protein	psRNATarget
HI410196.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   **||||||||||||||||||| targets:1   AUGUACUCCCUCCGUUUCUUU   21 Target Full Sequence	0.0	Sequence 8321 from Patent EP2074227	NA	coding protein	psRNATarget
EU971616.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAG-AAA   1   ***|=||||||||||||||||-||| targets:1156   CCUUGGUACUCCCUCCGUUUCGUUU   1180 Target Full Sequence	3.0	Zea mays clone 368130 rieske domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
HI403287.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   *|*|=*|||||||||||||||||| targets:5   AAAUGAUACUCCCUCCGUUUCUUU   28 Target Full Sequence	1.0	Sequence 1412 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235417.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   *|*|=*|||||||||||||||||| targets:5   AAAUGAUACUCCCUCCGUUUCUUU   28 Target Full Sequence	1.0	Sequence 1412 from Patent EP2985353	NA	coding protein	psRNATarget
JB163748.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   *|*|=*|||||||||||||||||| targets:5   AAAUGAUACUCCCUCCGUUUCUUU   28 Target Full Sequence	1.0	Sequence 1412 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241829.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   |=*|||||||||||||||||| targets:1   UGUUACUCCCUCCGUUUCUUU   21 Target Full Sequence	1.0	Sequence 7824 from Patent EP2985353	NA	coding protein	psRNATarget
JB170160.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   |=*|||||||||||||||||| targets:1   UGUUACUCCCUCCGUUUCUUU   21 Target Full Sequence	1.0	Sequence 7824 from Patent EP2559767	NA	coding protein	psRNATarget
HI409699.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   |=*|||||||||||||||||| targets:1   UGUUACUCCCUCCGUUUCUUU   21 Target Full Sequence	1.0	Sequence 7824 from Patent EP2074227	NA	coding protein	psRNATarget
HI407211.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAG-AAA   1   *=||-||||||||||||||||-||| targets:1   CGGU-GUACUCCCUCCGUUUCGUUU   24 Target Full Sequence	3.0	Sequence 5336 from Patent EP2074227	NA	coding protein	psRNATarget
JB167672.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAG-AAA   1   *=||-||||||||||||||||-||| targets:1   CGGU-GUACUCCCUCCGUUUCGUUU   24 Target Full Sequence	3.0	Sequence 5336 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239341.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAG-AAA   1   *=||-||||||||||||||||-||| targets:1   CGGU-GUACUCCCUCCGUUUCGUUU   24 Target Full Sequence	3.0	Sequence 5336 from Patent EP2985353	NA	coding protein	psRNATarget
HI407230.1	ncRNA:23   UCAUCAUGAGGGAGGCAAAG-AAA   1   ***|||||||||||||||||-||| targets:1   UAAAGUACUCCCUCCGUUUCGUUU   24 Target Full Sequence	3.0	Sequence 5355 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239360.1	ncRNA:23   UCAUCAUGAGGGAGGCAAAG-AAA   1   ***|||||||||||||||||-||| targets:1   UAAAGUACUCCCUCCGUUUCGUUU   24 Target Full Sequence	3.0	Sequence 5355 from Patent EP2985353	NA	coding protein	psRNATarget
JB167691.1	ncRNA:23   UCAUCAUGAGGGAGGCAAAG-AAA   1   ***|||||||||||||||||-||| targets:1   UAAAGUACUCCCUCCGUUUCGUUU   24 Target Full Sequence	3.0	Sequence 5355 from Patent EP2559767	NA	coding protein	psRNATarget
BT060817.2	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   ||**|*|||||||||||||||||| targets:224   UACCAAUACUCCCUCCGUUUCUUU   247 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds	NA	coding protein	psRNATarget
JB170476.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   **||||||||||=|||||||| targets:1   AUGUACUCCCUCUGUUUCUUU   21 Target Full Sequence	1.5	Sequence 8140 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242145.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   **||||||||||=|||||||| targets:1   AUGUACUCCCUCUGUUUCUUU   21 Target Full Sequence	1.5	Sequence 8140 from Patent EP2985353	NA	coding protein	psRNATarget
HI410015.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   **||||||||||=|||||||| targets:1   AUGUACUCCCUCUGUUUCUUU   21 Target Full Sequence	1.5	Sequence 8140 from Patent EP2074227	NA	coding protein	psRNATarget
BT055583.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAG-AAA   1   |*|*=||||||||||||||||-||| targets:829   UCGAGGUACUCCCUCCGUUUCGUUU   853 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0049P16 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153043.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAG-AAA   1   |*|*=||||||||||||||||-||| targets:829   UCGAGGUACUCCCUCCGUUUCGUUU   853 Target Full Sequence	3.0	Zea mays uncharacterized LOC100280105 (LOC100280105), mRNA	NA	coding protein	psRNATarget
EU970288.1	ncRNA:24   AUCAUCAUGAGGGAGGCAAAGAAA   1   |=***|||||||||=||||||||| targets:1325   UGCAUGUACUCCCUUCGUUUCUUU   1348 Target Full Sequence	1.5	Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds	NA	coding protein	psRNATarget
JB170076.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   *|*|||||||||||||||||| targets:1   AACUACUCCCUCCGUUUCUUU   21 Target Full Sequence	1.0	Sequence 7740 from Patent EP2559767	NA	coding protein	psRNATarget
HI409615.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   *|*|||||||||||||||||| targets:1   AACUACUCCCUCCGUUUCUUU   21 Target Full Sequence	1.0	Sequence 7740 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241745.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   *|*|||||||||||||||||| targets:1   AACUACUCCCUCCGUUUCUUU   21 Target Full Sequence	1.0	Sequence 7740 from Patent EP2985353	NA	coding protein	psRNATarget
JB170077.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   *|*|||||||||||||||||| targets:1   AACUACUCCCUCCGUUUCUUU   21 Target Full Sequence	1.0	Sequence 7741 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241746.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   *|*|||||||||||||||||| targets:1   AACUACUCCCUCCGUUUCUUU   21 Target Full Sequence	1.0	Sequence 7741 from Patent EP2985353	NA	coding protein	psRNATarget
LQ240748.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   *|*|||||||||||||||||| targets:1   AAUUACUCCCUCCGUUUCUUU   21 Target Full Sequence	1.0	Sequence 6743 from Patent EP2985353	NA	coding protein	psRNATarget
JB169079.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   *|*|||||||||||||||||| targets:1   AAUUACUCCCUCCGUUUCUUU   21 Target Full Sequence	1.0	Sequence 6743 from Patent EP2559767	NA	coding protein	psRNATarget
HI409616.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   *|*|||||||||||||||||| targets:1   AACUACUCCCUCCGUUUCUUU   21 Target Full Sequence	1.0	Sequence 7741 from Patent EP2074227	NA	coding protein	psRNATarget
HI408618.1	ncRNA:21   AUCAUGAGGGAGGCAAAGAAA   1   *|*|||||||||||||||||| targets:1   AAUUACUCCCUCCGUUUCUUU   21 Target Full Sequence	1.0	Sequence 6743 from Patent EP2074227	NA	coding protein	psRNATarget