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BaseInfo

ncRNA ID novel_zma_miR2100
Species Zea mays
Class miRNA
Genome position Chr2:230995489-230995639 [-]
Reference genome RefGen_v4
Source SRR2089711;SRR2089715;SRR2089701;SRR2089707;SRR2089708
Length 24
Mature sequence(if miRNA) 128 - GUGGUCUGCACACCUGGUCGGGGC - 151
Stem-loop(if miRNA) --    U UG -  A      C            A   -AAA      CCAGGGCUCUAAAUACUACAUCUAUAUAUA
  GUGG C  C AC CCUGGU GGGGCUUCCUGU GUU    UAGAGC                              U
  |||| |  | || |||||| |||||||||||| |||    ||||||
  CACU G  G UG GGACCG CCCCGAAGGGUA CGG    CCUUCG                              A
CG    - GU A  -      A            -   AUAG      GGACUCGAAGGUAAUGGUUGUAGUAUAUAU
Stem-loop sequence GUGGUCUGCACACCUGGUCGGGGCUUCCUGUAGUUAAAUAGAGCCCAGGGCUCUAAAUACUACAUCUAUAUAUAUAUAUAUAUGAUGUUGGUAAUGGAAGCUCAGGGCUUCCGAUAGGCAUGGGAAGCCCCAGCCAGGGUAGUGGUCACGC