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BaseInfo

ncRNA ID novel_zma_miR2097
Species Zea mays
Class miRNA
Genome position Chr10:106792557-106792746 [-]
Reference genome RefGen_v4
Source SRR2089711
Length 21
Mature sequence(if miRNA) 170 - AUAAAGAAGGAACGAUUCACA - 190
Stem-loop(if miRNA) --                  A                                      ----       AA       AAGAG       GAUGAUU
  AUAAAGAAGGAACGAUUC CAACAAUCUUCUUCAAUUUUUCCAUGAGCUUGAUUUCA    AUUCUUC  UUUUUCC     UUCAGAC       A
  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    |||||||  |||||||     |||||||       U
  UAUUUCUUCCUUGCUAAG GUUGUUAGAAGAAGUUAAAAAGGUACUCGAACUAAAGU    UGGGAGG  GAGGAGG     GAGUCUG       G
UA                  C                                      GAUC       AG       ---AG       AACAGGA
Stem-loop sequence AUAAAGAAGGAACGAUUCACAACAAUCUUCUUCAAUUUUUCCAUGAGCUUGAUUUCAAUUCUUCAAUUUUUCCAAGAGUUCAGACGAUGAUUAUGAGGACAAGUCUGAGGAGGAGGAGGAGGAGGGUCUAGUGAAAUCAAGCUCAUGGAAAAAUUGAAGAAGAUUGUUGCGAAUCGUUCCUUCUUUAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020544033.1
ncRNA:21   ACACUUAGCAAGGAAGAAAUA   1
  ||*||||||||||||||||||
targets:2078   UGCGAAUCGUUCCUUCUUUAU   2098

1.0 PREDICTED: Zea mays uncharacterized LOC103643856 (LOC103643856), mRNA NA coding protein psRNATarget
XM_008664899.2
ncRNA:21   ACACUUAGCAAGGAAGAAAUA   1
  ||*||||||||||||||||||
targets:296   UGCGAAUCGUUCCUUCUUUAU   316

1.0 PREDICTED: Zea mays uncharacterized LOC103641552 (LOC103641552), mRNA NA coding protein psRNATarget