ncRNA ID | novel_zma_miR2097 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:106792557-106792746 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089711 |
Length | 21 |
Mature sequence(if miRNA) | 170 - AUAAAGAAGGAACGAUUCACA - 190 |
Stem-loop(if miRNA) |
--                  A                                      ----       AA       AAGAG       GAUGAUU   AUAAAGAAGGAACGAUUC CAACAAUCUUCUUCAAUUUUUCCAUGAGCUUGAUUUCA    AUUCUUC  UUUUUCC     UUCAGAC       A   |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    |||||||  |||||||     |||||||       U   UAUUUCUUCCUUGCUAAG GUUGUUAGAAGAAGUUAAAAAGGUACUCGAACUAAAGU    UGGGAGG  GAGGAGG     GAGUCUG       G UA                  C                                      GAUC       AG       ---AG       AACAGGA |
Stem-loop sequence | AUAAAGAAGGAACGAUUCACAACAAUCUUCUUCAAUUUUUCCAUGAGCUUGAUUUCAAUUCUUCAAUUUUUCCAAGAGUUCAGACGAUGAUUAUGAGGACAAGUCUGAGGAGGAGGAGGAGGAGGGUCUAGUGAAAUCAAGCUCAUGGAAAAAUUGAAGAAGAUUGUUGCGAAUCGUUCCUUCUUUAUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020544033.1 |
|
1.0 | PREDICTED: Zea mays uncharacterized LOC103643856 (LOC103643856), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008664899.2 |
|
1.0 | PREDICTED: Zea mays uncharacterized LOC103641552 (LOC103641552), mRNA | NA | coding protein | psRNATarget |