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BaseInfo

ncRNA ID	novel_zma_miR2085
Species	Zea mays
Class	miRNA
Genome position	Chr2:178617696-178617828 [+]
Reference genome	RefGen_v4
Source	SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR2089700;SRR2089701
Length	21
Mature sequence(if miRNA)	113 - UGAGGUGAUUGAGGACAUCAU - 133
Stem-loop(if miRNA)	--                    U                ----UC        CG      AACCAAA   GAUGUCCUCAAUUACCUCAG AAAUAUGAACUUAAAU      AACUUUUA  UGGAGA       A   |||||||||||||||||||| ||||||||||||||||      ||||||||  ||||||       A   CUACAGGAGUUAGUGGAGUC UUUAUACUUGAGUUUA      UUGAAAAU  ACCUCU       G UA                    C                UUUAAA        AU      CUAAACA
Stem-loop sequence	GAUGUCCUCAAUUACCUCAGUAAAUAUGAACUUAAAUUCAACUUUUACGUGGAGAAACCAAAAAGACAAAUCUCUCCAUAUAAAAGUUAAAUUUAUUUGAGUUCAUAUUUCCUGAGGUGAUUGAGGACAUCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020542332.1	ncRNA:21   UACUACAGGAGUUAGUGGAGU   1   *****|||||||||||||||| targets:100   CACCAGUCCUCAAUCACCUCA   120 Target Full Sequence	3.0	PREDICTED: Zea mays octopine synthase binding factor 3 (obf3.2), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008657214.2	ncRNA:21   UACUACAGGAGUUAGUGGAGU   1   *****|||||||||||||||| targets:101   CACCAGUCCUCAAUCACCUCA   121 Target Full Sequence	3.0	PREDICTED: Zea mays octopine synthase binding factor 3 (obf3.2), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008657213.2	ncRNA:21   UACUACAGGAGUUAGUGGAGU   1   *****|||||||||||||||| targets:101   CACCAGUCCUCAAUCACCUCA   121 Target Full Sequence	3.0	PREDICTED: Zea mays octopine synthase binding factor 3 (obf3.2), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008657212.2	ncRNA:21   UACUACAGGAGUUAGUGGAGU   1   *****|||||||||||||||| targets:101   CACCAGUCCUCAAUCACCUCA   121 Target Full Sequence	3.0	PREDICTED: Zea mays octopine synthase binding factor 3 (obf3.2), transcript variant X1, mRNA	NA	coding protein	psRNATarget