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BaseInfo

ncRNA ID	novel_zma_miR2079
Species	Zea mays
Class	miRNA
Genome position	Chr2:149395565-149395654 [+]
Reference genome	RefGen_v4
Source	SRR2089711;SRR2089707
Length	24
Mature sequence(if miRNA)	67 - AGUGUAAUGUCUCUGGCACUCGGC - 90
Stem-loop(if miRNA)	--     U      C   A       A         AAGAC       CGAGU UCAGGG CAU ACACUCG CAAAGAACC     CUGGG   ||||| |||||| ||| ||||||| |||||||||     ||||C   GCUCA GGUCUC GUA UGUGAGC GUUUCUUGG     GGCCA CG     C      U   A       C         -AUAC
Stem-loop sequence	CGAGUUUCAGGGCCAUAACACUCGACAAAGAACCAAGACCUGGGCACCGGCAUAGGUUCUUUGCCGAGUGUAAUGUCUCUGGCACUCGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ238769.1	ncRNA:24   CGGCUCACGGUCUCUGUAAUGUGA   1   |||||||||||*|||||||||||| targets:175   GCCGAGUGCCAUAGACAUUACACU   198 Target Full Sequence	1.5	Sequence 4764 from Patent EP2985353	NA	coding protein	psRNATarget
HI406639.1	ncRNA:24   CGGCUCACGGUCUCUGUAAUGUGA   1   |||||||||||*|||||||||||| targets:175   GCCGAGUGCCAUAGACAUUACACU   198 Target Full Sequence	1.5	Sequence 4764 from Patent EP2074227	NA	coding protein	psRNATarget
JB167100.1	ncRNA:24   CGGCUCACGGUCUCUGUAAUGUGA   1   |||||||||||*|||||||||||| targets:175   GCCGAGUGCCAUAGACAUUACACU   198 Target Full Sequence	1.5	Sequence 4764 from Patent EP2559767	NA	coding protein	psRNATarget
HI407027.1	ncRNA:20   UCACGGUCUCUGUAAUGUGA   1   |||||||*|||||||||||| targets:1   AGUGCCACAGACAUUACACU   20 Target Full Sequence	1.5	Sequence 5152 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239157.1	ncRNA:20   UCACGGUCUCUGUAAUGUGA   1   |||||||*|||||||||||| targets:1   AGUGCCACAGACAUUACACU   20 Target Full Sequence	1.5	Sequence 5152 from Patent EP2985353	NA	coding protein	psRNATarget
JB167488.1	ncRNA:20   UCACGGUCUCUGUAAUGUGA   1   |||||||*|||||||||||| targets:1   AGUGCCACAGACAUUACACU   20 Target Full Sequence	1.5	Sequence 5152 from Patent EP2559767	NA	coding protein	psRNATarget