Search result

BaseInfo

ncRNA ID novel_zma_miR2076
Species Zea mays
Class miRNA
Genome position Chr2:11294530-11294585 [+]
Reference genome RefGen_v4
Source SRR2089711;SRR1997865
Length 23
Mature sequence(if miRNA) 34 - AAGGACAACUGUAGGUGGGCCUC - 56
Stem-loop(if miRNA) --   A  -UA  G        GAG    
  GGC CC   UA GGUUGUCU   GUCCG
  ||| ||   || ||||||||   ||||U
  CCG GG   AU UCAACAGG   CAGGU
CU   -  UGG  G        -AA    
Stem-loop sequence GGCACCUAUAGGGUUGUCUGAGGUCCGUUGGACAAGGACAACUGUAGGUGGGCCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT038945.1
ncRNA:23   CUCCGGGUGGAUGUCAACAGGAA   1
  *||||||||||||||||||||||
targets:625   UAGGCCCACCUACAGUUGUCCUU   647

0.0 Zea mays full-length cDNA clone ZM_BFb0341N05 mRNA, complete cds NA coding protein psRNATarget
EZ106947.1
ncRNA:23   CUCCGGGUGGAUGUCAACAGGAA   1
  *||||||=|||||||||||||||
targets:167   UAGGCCCGCCUACAGUUGUCCUU   189

1.0 TSA: Zea mays contig42605, mRNA sequence NA coding protein psRNATarget
EU944407.1
ncRNA:23   CUCCGGGUGGAUGUCAACAGGAA   1
  *||*||||||||||||||*||||
targets:217   UAGACCCACCUACAGUUGGCCUU   239

1.5 Zea mays clone 217991 mRNA sequence NA coding protein psRNATarget