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BaseInfo

ncRNA ID	novel_zma_miR2075
Species	Zea mays
Class	miRNA
Genome position	Chr1:105588272-105588469 [+]
Reference genome	RefGen_v4
Source	SRR2089711;SRR5451006
Length	24
Mature sequence(if miRNA)	1 - UACUAGGUGCAAGCGUGUAAGCAG - 24
Stem-loop(if miRNA)	--     GG        UG        CU    A   C    A     U   C       GAUACAAU   G  UUG    G    --U     --AAA     A   UACUA  UGCAAGCG  UAAGCAGA  UUUU GUC GUUA AUCUG AUC AAUGGUA        UGU AU   UUAG GUUU   UUUAU     GCUAU C   |||||  ||||||||  ||||||||  |||| ||| |||| ||||| ||| |||||||        ||| ||   |||| ||||   |||||     ||||| U   AUGAU  ACGUUCGU  GUUCGUCU  AAAA UAG CAAU UAGAU UAG UUGCCAU        ACA UA   AAUC UAAA   GGGUA     UGGUG A AC     AA        GU        AU    C   A    C     U   C       --------   G  -UA    G    UUU     GGUAG     G
Stem-loop sequence	UACUAGGUGCAAGCGUGUAAGCAGACUUUUUAGUCCGUUAAAUCUGUAUCCAAUGGUAGAUACAAUUGUGAUUUGUUAGGGUUUUUUUAUAAAGCUAUACUAGGUGGUGAUGGAUGGGUUUAAAUGCUAAAUAUGACAUACCGUUCGAUUUAGAUCUAACAGAUCAAAAUAUCUGCUUGUGUGCUUGCAAAUAGUACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020543506.1	ncRNA:24   GACGAAUGUGCGAACGUGGAUCAU   1   |||||||||||||||||||||||| targets:824   CUGCUUACACGCUUGCACCUAGUA   847 Target Full Sequence	0.0	PREDICTED: Zea mays putative RING zinc finger domain superfamily protein (LOC100216754), transcript variant X2, mRNA	NA	coding protein	psRNATarget
HI410097.1	ncRNA:24   GACGAAUGUGCGAACGUGGAUCAU   1   |||||||=|||||||||||||||| targets:196   CUGCUUAUACGCUUGCACCUAGUA   219 Target Full Sequence	1.0	Sequence 8222 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242227.1	ncRNA:24   GACGAAUGUGCGAACGUGGAUCAU   1   |||||||=|||||||||||||||| targets:196   CUGCUUAUACGCUUGCACCUAGUA   219 Target Full Sequence	1.0	Sequence 8222 from Patent EP2985353	NA	coding protein	psRNATarget
JB170558.1	ncRNA:24   GACGAAUGUGCGAACGUGGAUCAU   1   |||||||=|||||||||||||||| targets:196   CUGCUUAUACGCUUGCACCUAGUA   219 Target Full Sequence	1.0	Sequence 8222 from Patent EP2559767	NA	coding protein	psRNATarget
EU956751.1	ncRNA:24   GACGAAUGUGCGAACGUGGAUCAU   1   |||||||=|||||||||||||||| targets:1005   CUGCUUAUACGCUUGCACCUAGUA   1028 Target Full Sequence	1.0	Zea mays clone 1572581 mRNA sequence	NA	coding protein	psRNATarget
NM_001154384.2	ncRNA:24   GACGAAUGUGCGAACGUGGAUCAU   1   *|*|*||*|||||||||||||||| targets:1   AUUCAUAAACGCUUGCACCUAGUA   24 Target Full Sequence	1.0	Zea mays uncharacterized LOC100281466 (cl33552_1), mRNA	NA	coding protein	psRNATarget