Search result

BaseInfo

ncRNA ID novel_zma_miR2064
Species Zea mays
Class miRNA
Genome position Chr1:7252911-7252965 [-]
Reference genome RefGen_v4
Source SRR2089711;SRR2089715;SRR5451003;SRR2089702
Length 24
Mature sequence(if miRNA) 32 - GCGGGAUGGUUCCGGAUCUGAGGA - 55
Stem-loop(if miRNA) --               -AUC    GAG
  GCGGGAUGGUUCCGG    UGAG   A
  |||||||||||||||    ||||
  UGCCUUACCGAGGUU    ACUU   A
CU               AAUC    AAU
Stem-loop sequence GCGGGAUGGUUCCGGAUCUGAGGAGAAUAAUUCACUAAUUGGAGCCAUUCCGUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY111106.1
ncRNA:24   AGGAGUCUAGGCCUUGGUAGGGCG   1
  ||||||||||||||||||||||||
targets:274   UCCUCAGAUCCGGAACCAUCCCGC   297

0.0 Zea mays CL29481_1 mRNA sequence NA coding protein psRNATarget
XM_008665021.2
ncRNA:24   AGGAG-UCUAGGCCUUGGUAGGGCG   1
  *||||-|||||||||||||||||||
targets:1754   CCCUCCAGAUCCGGAACCAUCCCGC   1778

2.0 PREDICTED: Zea mays uncharacterized LOC103641703 (LOC103641703), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020545726.1
ncRNA:24   AGGAG-UCUAGGCCUUGGUAGGGCG   1
  *||||-|||||||||||||||||||
targets:3456   CCCUCCAGAUCCGGAACCAUCCCGC   3480

2.0 PREDICTED: Zea mays uncharacterized LOC103641703 (LOC103641703), transcript variant X2, mRNA NA coding protein psRNATarget